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BaseInfo

ncRNA ID osa-miRf11979-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGUUAAUGCCCGUCACAGAU - NA
Stem-loop(if miRNA)      CUA                      --       CAAUCA   CUA    AAU     UCAC     A  AUAAU
CGGGC   AGUUAAUGCCCGUCACAGAUGA  GUCAUCU      GGC   AGUU   GCCCG    AGAUG GU     C
|||||   ||||||||||||||||||||||  |||||||      |||   ||||   |||||    ||||| ||     C
GCCCG   UCAAUUACGGGCAGUGUCUAUU  CAGUAGA      CCG   UCAA   CGGGC    UCUAU CA     A
     AUA                      CC       CACUAC   AUA    AUC     UAAC     C  AAAAA
Stem-loop sequence CGGGCCUAAGUUAAUGCCCGUCACAGAUGAGUCAUCUCAAUCAGGCCUAAGUUAAUGCCCGUCACAGAUGAGUAUAAUCCAAAAAAACCUAUCUCAAUCGGGCCUAAACUAUAGCCCAUCACAGAUGACCCUUAUCUGUGACGGGCAUUAACUAUAGCCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015768179.1
ncRNA:20   UAGACACUGCCCGUAAUUGA   1
  *||||||||||||||*||||
targets:433   CUCUGUGACGGGCAUCAACU   452

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277277 (LOC107277277), mRNA uncharacterized LOC107277277(LOC107277277) coding protein psRNATarget
AK120293.1
ncRNA:20   UAGACACUGCCCGUAAUUGA   1
  *|*||||||||||||*||||
targets:303   CUAUGUGACGGGCAUCAACU   322

2.5 Oryza sativa Japonica Group cDNA clone:J013050K22, full insert sequence NA coding protein psRNATarget