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BaseInfo

ncRNA ID osa-miRf11978-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AAGUUGGUGCCCGUCACAGAUGA - NA
Stem-loop(if miRNA)                 C       AAG     U        UGG
GUCAUCUGUGAUGGGC CCAACUU   GCCCG UUGAGAUA   A
|||||||||||||||| |||||||   ||||| ||||||||
UAGUAGACACUGCCCG GGUUGAA   UGGGC AACUCUAU   A
                U       AUA     U        UGU
Stem-loop sequence GUCAUCUGUGAUGGGCCCCAACUUAAGGCCCGUUUGAGAUAUGGAAUGUUAUCUCAAUCGGGUAUAAAGUUGGUGCCCGUCACAGAUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK119390.1
ncRNA:23   AGUAGACACUGCCCGUGGUUGAA   1
  *|||||||||||||||||||=||
targets:3040   CCAUCUGUGACGGGCACCAAUUU   3062

1.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK107543.1
ncRNA:23   AGUAGACACUGCCCGUGGUUGAA   1
  |||||||||||||||*|||||||
targets:1632   UCAUCUGUGACGGGCCCCAACUU   1654

1.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget
XM_015768179.1
ncRNA:23   AGUAGACACUGCCCGUGGUUGAA   1
  |**|||||||||||||=|||||*
targets:431   UACUCUGUGACGGGCAUCAACUA   453

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277277 (LOC107277277), mRNA uncharacterized LOC107277277(LOC107277277) coding protein psRNATarget