ncRNA ID | osa-miRf11978-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - AAGUUGGUGCCCGUCACAGAUGA - NA |
Stem-loop(if miRNA) |
                C       AAG     U        UGG GUCAUCUGUGAUGGGC CCAACUU   GCCCG UUGAGAUA   A |||||||||||||||| |||||||   ||||| |||||||| UAGUAGACACUGCCCG GGUUGAA   UGGGC AACUCUAU   A                 U       AUA     U        UGU |
Stem-loop sequence | GUCAUCUGUGAUGGGCCCCAACUUAAGGCCCGUUUGAGAUAUGGAAUGUUAUCUCAAUCGGGUAUAAAGUUGGUGCCCGUCACAGAUGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK119390.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK107543.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015768179.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277277 (LOC107277277), mRNA | uncharacterized LOC107277277(LOC107277277) | coding protein | psRNATarget |