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BaseInfo

ncRNA ID osa-miRf11977-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UCCCGGUUAGUAUUACCAACCG - NA
Stem-loop(if miRNA)      C      A                    A    -UUUU   C
UAGUC CGGUUG UAAUACUAACCGGGACUAAA AUUA     GAU U
||||| |||||| |||||||||||||||||||| ||||     ||| U
AUCAG GCCAAC AUUAUGAUUGGCCCUGAUUU UAGU     CUG U
     A      C                    C    UUUAU   A
Stem-loop sequence UAGUCCCGGUUGAUAAUACUAACCGGGACUAAAAAUUAUUUUGAUCUUUAGUCUAUUUUGAUCUUUAGUCCCGGUUAGUAUUACCAACCGAGACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288424.1
ncRNA:22   GCCAACCAUUAUGAUUGGCCCU   1
  |||||||||||||*||||||||
targets:1381   CGGUUGGUAAUACCAACCGGGA   1402

1.5 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget
AK061057.1
ncRNA:22   GCCAACCAUUAUGAUUGGCCCU   1
  =||||||||||||*||||||||
targets:365   UGGUUGGUAAUACCAACCGGGA   386

1.5 Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence NA coding protein psRNATarget