ncRNA ID | osa-miRf11971-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CACUACCAACCGGGACUAAAG - NA |
Stem-loop(if miRNA) |
   UGAC   A                  UACCA     G      A     C   C                 A GGU    ACU CCAACCGGGACUAAAGAU     CUUUA UCCCGG UGGUA UAU AACCGGGAGUAAAGAUC U |||    ||| ||||||||||||||||||     ||||| |||||| ||||| ||| ||||||||||||||||| U CCA    UGA GGUUGGCCCUGAUUUCUA     GAAAU AGGGCC ACCAU AUG UUGGUCCUUAUUUCUAG U    ---U   -                  -UCUA     G      A     C   U                 A |
Stem-loop sequence | GGUUGACACUACCAACCGGGACUAAAGAUUACCACUUUAGUCCCGGAUGGUACUAUCAACCGGGAGUAAAGAUCAUUUAGAUCUUUAUUCCUGGUUUGUACUACCAACCGGGAGUAAAGAUCUAUCUUUAGUCCCGGUUGGAGUUACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK065811.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK099726.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK121178.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence | NA | coding protein | psRNATarget |