Search result

BaseInfo

ncRNA ID osa-miRf11971-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CACUACCAACCGGGACUAAAG - NA
Stem-loop(if miRNA)    UGAC   A                  UACCA     G      A     C   C                 A
GGU    ACU CCAACCGGGACUAAAGAU     CUUUA UCCCGG UGGUA UAU AACCGGGAGUAAAGAUC U
|||    ||| ||||||||||||||||||     ||||| |||||| ||||| ||| ||||||||||||||||| U
CCA    UGA GGUUGGCCCUGAUUUCUA     GAAAU AGGGCC ACCAU AUG UUGGUCCUUAUUUCUAG U
   ---U   -                  -UCUA     G      A     C   U                 A
Stem-loop sequence GGUUGACACUACCAACCGGGACUAAAGAUUACCACUUUAGUCCCGGAUGGUACUAUCAACCGGGAGUAAAGAUCAUUUAGAUCUUUAUUCCUGGUUUGUACUACCAACCGGGAGUAAAGAUCUAUCUUUAGUCCCGGUUGGAGUUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK065811.1
ncRNA:21   GAAAUCAGGGCCAACCAUCAC   1
  |||||||||||||||||||**
targets:1908   CUUUAGUCCCGGUUGGUAGCA   1928

2.5 Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence NA coding protein psRNATarget
AK099726.1
ncRNA:21   GAAAUCAGGGCCAACCAUCAC   1
  |||||||*||||||||||||*
targets:1095   CUUUAGUACCGGUUGGUAGUA   1115

2.0 Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence NA coding protein psRNATarget
AK121178.1
ncRNA:21   GAAAUCAGGGCCAACCAUCAC   1
  ||||||||||||||||||*|*
targets:1911   CUUUAGUCCCGGUUGGUAUUA   1931

2.5 Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence NA coding protein psRNATarget