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BaseInfo

ncRNA ID	osa-miRf11963-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UUAGUCCCGGAUUCGUAGUCCC - NA
Stem-loop(if miRNA)	GCAA             A      GU   G    G  AAC     UUUUUAGUCCCGG UUCGUA  CCC CUUG AG   C     ||||||||||||| ||||||  ||| |||| ||     AAAAAUCAGGGCC AAGCAU  GGG GGAC UC   G --CG             -      UG   G    A  AGG
Stem-loop sequence	GCAAUUUUUAGUCCCGGAUUCGUAGUCCCGCUUGGAGAACCGGGACUACAGGGGGGGUUACGAACCGGGACUAAAAAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242216.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   |||||||||||||||||||||| targets:611   GGGACUACGAAUCCGGGACUAA   632 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK065634.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   |||||||||||||||||||||| targets:1870   GGGACUACGAAUCCGGGACUAA   1891 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013034I10, full insert sequence	NA	coding protein	psRNATarget
AK241906.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   |||||||||||||||||||||| targets:1680   GGGACUACGAAUCCGGGACUAA   1701 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   |||||||||||||||||||||| targets:1301   GGGACUACGAAUCCGGGACUAA   1322 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   |||||||||||||=|||||||| targets:1311   GGGACUACGAAUCUGGGACUAA   1332 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288863.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   *||||||||||||||||||||| targets:985   UGGACUACGAAUCCGGGACUAA   1006 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090077I20, full insert sequence	NA	coding protein	psRNATarget
XM_015778766.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   ||||||||*||||||||||||| targets:991   GGGACUACCAAUCCGGGACUAA   1012 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group jacalin-related lectin 9 (LOC4335495), mRNA	jacalin-related lectin 9(LOC4335495)	coding protein	psRNATarget
AK288462.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   ||||||||||*||||||||||| targets:2825   GGGACUACGACUCCGGGACUAA   2846 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090036C06, full insert sequence	NA	coding protein	psRNATarget
AK072169.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   **|||||||||||||||||||| targets:3272   CUGACUACGAAUCCGGGACUAA   3293 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013132E11, full insert sequence	NA	coding protein	psRNATarget
AK105552.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   *|||||||*||||||||||||| targets:1205   AGGACUACCAAUCCGGGACUAA   1226 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-128-A12, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   ||||*|||*||||||||||||| targets:1763   GGGAGUACCAAUCCGGGACUAA   1784 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK065811.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   *|||*||*|||||||||||||| targets:1843   AGGAGUAGGAAUCCGGGACUAA   1864 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget
AK066662.1	ncRNA:22   CCCUGAUGCUUAGGCCCUGAUU   1   ||||*||**||||||||||||| targets:587   GGGAGUAGCAAUCCGGGACUAA   608 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013071A17, full insert sequence	NA	coding protein	psRNATarget