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BaseInfo

ncRNA ID osa-miRf11962-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGGUUACGAACCGGGACUAAA - NA
Stem-loop(if miRNA) GCAA             A      GU   G    G  AAC
    UUUUUAGUCCCGG UUCGUA  CCC CUUG AG   C
    ||||||||||||| ||||||  ||| |||| ||
    AAAAAUCAGGGCC AAGCAU  GGG GGAC UC   G
--CG             -      UG   G    A  AGG
Stem-loop sequence GCAAUUUUUAGUCCCGGAUUCGUAGUCCCGCUUGGAGAACCGGGACUACAGGGGGGGUUACGAACCGGGACUAAAAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK241906.1
ncRNA:21   AAAUCAGGGCCAAGCAUUGGG   1
  |||||||*||||||||||||=
targets:1635   UUUAGUCGCGGUUCGUAACCU   1655

2.0 Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence NA coding protein psRNATarget
AK105552.1
ncRNA:21   AAAUCAGGGCCAAGCAUUGGG   1
  |||||||*|||||||*|||||
targets:1165   UUUAGUCACGGUUCGCAACCC   1185

2.5 Oryza sativa Japonica Group cDNA clone:001-128-A12, full insert sequence NA coding protein psRNATarget
AK121472.1
ncRNA:21   AAAUCAGGGCCAAGCAUUGGG   1
  ||*|*||*|||||||||||||
targets:1361   UUCACUCACGGUUCGUAACCC   1381

3.0 Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence NA coding protein psRNATarget