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BaseInfo

ncRNA ID	osa-miRf11951-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UCCGUGUCUAACGUUUGACCGUCC - NA
Stem-loop(if miRNA)	---              A      U     AAAUUAUGAAAAAAAUUAAAAA  UAAAUCAUGCAUGAAAUAUUAUUC GUUUCCGUGUCUA   ACGUUUGACCGUCC UCUUAU UGAGA                      GA                        A |||||||||||||   |||||||||||||| |||||| |||||                      ||                        U CAAAGGCACAGGU   UGCAAACUGGCAGG AGAAUA ACUUU                      UA                        A              UGU              C      U     --------AAAAAAAUUAAUCA  AAAGUAAUAAAAAUCUACUAUUUU
Stem-loop sequence	GUUUCCGUGUCUAACGUUUGACCGUCCAUCUUAUUUGAGAAAAUUAUGAAAAAAAUUAAAAAGAUAAAUCAUGCAUGAAAUAUUAUUCAUAUUUUAUCAUCUAAAAAUAAUGAAAAUACUAAUUAAAAAAAUUUCAUAUAAGACGGACGGUCAAACGUUGUUGGACACGGAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK108746.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   |||||||||||||||=|||||||| targets:1442   GGACGGUCAAACGUUGGACACGGA   1465 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-150-E12, full insert sequence	NA	coding protein	psRNATarget
XM_015787836.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   |||||||||||||||=|||||||| targets:1249   GGACGGUCAAACGUUGGACACGGA   1272 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342071 (LOC4342071), mRNA	uncharacterized LOC4342071(LOC4342071)	coding protein	psRNATarget
XM_015787694.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   |||||||||||||||=|||||||| targets:1495   GGACGGUCAAACGUUGGACACGGA   1518 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group acetylajmalan esterase (LOC4341925), mRNA	acetylajmalan esterase(LOC4341925)	coding protein	psRNATarget
AK071262.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   |||||||||||||||=|||||||| targets:1377   GGACGGUCAAACGUUGGACACGGA   1400 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023085J06, full insert sequence	NA	coding protein	psRNATarget
XM_015787999.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   ||||||||||||||||||||=||| targets:887   GGACGGUCAAACGUUAGACAUGGA   910 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable glycosyltransferase At5g25310 (LOC107278352), transcript variant X2, mRNA	probable glycosyltransferase At5g25310(LOC107278352)	coding protein	psRNATarget
XM_015787998.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   ||||||||||||||||||||=||| targets:1687   GGACGGUCAAACGUUAGACAUGGA   1710 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable glycosyltransferase At5g25310 (LOC107278352), transcript variant X1, mRNA	probable glycosyltransferase At5g25310(LOC107278352)	coding protein	psRNATarget
CT827968.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   *||||||||||||||=|||||||| targets:465   AGACGGUCAAACGUUGGACACGGA   488 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN031I05, full insert sequence	NA	coding protein	psRNATarget
XM_015759207.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   |*|||||||||||||=|||||||| targets:56   GAACGGUCAAACGUUGGACACGGA   79 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group piriformospora indica-insensitive protein 2 (LOC4323927), mRNA	piriformospora indica-insensitive protein 2(LOC4323927)	coding protein	psRNATarget
CT836215.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   |*||||||||||||||||||=||| targets:1156   GAACGGUCAAACGUUAGACAUGGA   1179 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA223F11, full insert sequence	NA	coding protein	psRNATarget
AK288660.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   **|=|||||||||||||||||||| targets:1506   AAAUGGUCAAACGUUAGACACGGA   1529 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090057N05, full insert sequence	NA	coding protein	psRNATarget
XM_015791152.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   ||||*||||||||||||||||*|| targets:31   GGACCGUCAAACGUUAGACACAGA   54 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343919 (LOC4343919), transcript variant X1, mRNA	uncharacterized LOC4343919(LOC4343919)	coding protein	psRNATarget
XM_015791153.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   ||||*||||||||||||||||*|| targets:31   GGACCGUCAAACGUUAGACACAGA   54 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343919 (LOC4343919), transcript variant X2, mRNA	uncharacterized LOC4343919(LOC4343919)	coding protein	psRNATarget
AK068975.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   ||||*||||||||||||||||*|| targets:2301   GGACCGUCAAACGUUAGACACAGA   2324 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013170L10, full insert sequence	NA	coding protein	psRNATarget
XM_015783613.1	ncRNA:19   CAGUUUGCAAUCUGUGCCU   1   ||||||=|||||||||||| targets:1   GUCAAAUGUUAGACACGGA   19 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339531 (LOC4339531), mRNA	uncharacterized LOC4339531(LOC4339531)	coding protein	psRNATarget
AK068180.1	ncRNA:24   CCUGCCAGUUUGCAAUCUGUGCCU   1   **|**|*||||||||=|||||||| targets:456   AAAAAGACAAACGUUGGACACGGA   479 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013135E14, full insert sequence	NA	coding protein	psRNATarget