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BaseInfo

ncRNA ID	osa-miRf11948-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UCCCGGUUGGUAACACCAACCGGG - NA
Stem-loop(if miRNA)	UU  C        A            G      AAU AUCUUU  UC CGGUUGGU ACACCAACCGGG ACUAAA   A ||||||  || |||||||| |||||||||||| |||||| UAGAAA  AG GCCAACCA UGUGGUUGGCCC UGAUUU   G       UC  U        C            -      CUA
Stem-loop sequence	AUCUUUUUUCCCGGUUGGUAACACCAACCGGGGACUAAAAAUAGAUCUUUAGUCCCGGUUGGUGUCACCAACCGUGACUAAAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |||||||||||||||||||||||| targets:157   CCCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   ||||||||||*||||||||||||| targets:114   CCCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
HI404518.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |||||||||||*|||||||||||| targets:53   CCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	1.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |||||||||||*|||||||||||| targets:53   CCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	1.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
JB164979.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |||||||||||*|||||||||||| targets:53   CCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	1.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |||||||*|||||||||||||||| targets:916   CCCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288377.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   ||||||||||||||||||||*||| targets:1386   CCCGGUUGGUGUUACCAACCUGGA   1409 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |||||||*|||||||||||||||| targets:2391   CCCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   ||||||||||**|||||||||||| targets:1379   CCCGGUUGGUAAUACCAACCGGGA   1402 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   ||||||||||||||||||||||*| targets:1840   CCCGGUUGGUGUUACCAACCGGAA   1863 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |||*|||||||||||||||||||| targets:2398   CCCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
XM_015755226.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   ||||||||*|||||||||||||*| targets:80   CCCGGUUGAUGUUACCAACCGGUA   103 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
HI404286.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |=||*||||||||||||||=|||* targets:4   CUCGAUUGGUGUUACCAACUGGGU   27 Target Full Sequence	2.5	Sequence 2411 from Patent EP2074227	NA	coding protein	psRNATarget
JB164747.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |=||*||||||||||||||=|||* targets:4   CUCGAUUGGUGUUACCAACUGGGU   27 Target Full Sequence	2.5	Sequence 2411 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236416.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |=||*||||||||||||||=|||* targets:4   CUCGAUUGGUGUUACCAACUGGGU   27 Target Full Sequence	2.5	Sequence 2411 from Patent EP2985353	NA	coding protein	psRNATarget
AK061057.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   |==|||||||**|||||||||||| targets:363   CUUGGUUGGUAAUACCAACCGGGA   386 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:24   GGGCCAACCACAAUGGUUGGCCCU   1   *||||||*||||||||||||*||| targets:4963   ACCGGUUAGUGUUACCAACCAGGA   4986 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget