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BaseInfo

ncRNA ID osa-miRf11944-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UAGUCCCGGUUGUUCAACCGG - NA
Stem-loop(if miRNA)       CC                -  A      CUA  AAUCCGGG
GUAACC  UUUAGUCCCGGUUGUU CA CCGGGA   CG        A
||||||  |||||||||||||||| || ||||||   ||
CAUUGG  AAAUCAGGGCCAAUAA GU GGCCCU   CG        C
      --                A  G      --A  AUAGAAAU
Stem-loop sequence GUAACCCCUUUAGUCCCGGUUGUUCAACCGGGACUACGAAUCCGGGACUAAAGAUAGCAUCCCGGGUGAAAUAACCGGGACUAAAGGUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288799.1
ncRNA:21   GGCCAACUUGUUGGCCCUGAU   1
  |||||||||*|||||||||||
targets:358   CCGGUUGAAAAACCGGGACUA   378

1.5 Oryza sativa Japonica Group cDNA, clone: J090070K11, full insert sequence NA coding protein psRNATarget
AK288424.1
ncRNA:21   GGCCAACUUGUUGGCCCUGAU   1
  ||||||**|||||||||||||
targets:1287   CCGGUUAUACAACCGGGACUA   1307

2.0 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget
AK288438.1
ncRNA:21   GGCCAACUUGUUGGCCCUGAU   1
  |||||||*|=|||||||||||
targets:2472   CCGGUUGCAUAACCGGGACUA   2492

2.5 Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence NA coding protein psRNATarget