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BaseInfo

ncRNA ID osa-miRf11941-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - GUGCCGGUUGGGAAAUCCGACACC - NA
Stem-loop(if miRNA)       -AAA A      -     A         CUUUGAG   A UG U
AACCUC    G UGUCGG UUUCU AACCGGCAC       ACA G  G C
||||||    | |||||| ||||| |||||||||       ||| |  |
UUGGGG    C ACAGCC AAAGG UUGGCCGUG       UGU C  C C
      GAAC C      U     G         -------   - GU C
Stem-loop sequence AACCUCAAAGAUGUCGGUUUCUAAACCGGCACCUUUGAGACAAGUGGUCCCCUGCUGUGUGCCGGUUGGGAAAUCCGACACCCAAGGGGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI404011.1
ncRNA:24   CCACAGCCUAAAGGGUUGGCCGUG   1
  ||||*|||||||||||||||||||
targets:26   GGUGCCGGAUUUCCCAACCGGCAC   49

0.0 Sequence 2136 from Patent EP2074227 NA coding protein psRNATarget
JB164472.1
ncRNA:24   CCACAGCCUAAAGGGUUGGCCGUG   1
  ||||*|||||||||||||||||||
targets:26   GGUGCCGGAUUUCCCAACCGGCAC   49

0.0 Sequence 2136 from Patent EP2559767 NA coding protein psRNATarget
LQ236141.1
ncRNA:24   CCACAGCCUAAAGGGUUGGCCGUG   1
  ||||*|||||||||||||||||||
targets:26   GGUGCCGGAUUUCCCAACCGGCAC   49

0.0 Sequence 2136 from Patent EP2985353 NA coding protein psRNATarget
AK100763.1
ncRNA:24   CCACAGCCUAAAGGGUUGGCCGUG   1
  ||||*|||*|||||||||||||||
targets:1442   GGUGCCGGUUUUCCCAACCGGCAC   1465

1.0 Oryza sativa Japonica Group cDNA clone:J023119J04, full insert sequence NA coding protein psRNATarget
AK100763.1
ncRNA:24   CCACAGCCUAAAGGGUUGGCCGUG   1
  ||||*|||*|||||||||||||||
targets:1498   GGUGCCGGUUUUCCCAACCGGCAC   1521

1.0 Oryza sativa Japonica Group cDNA clone:J023119J04, full insert sequence NA coding protein psRNATarget
AK099706.1
ncRNA:24   CCACAGCCUAAAGGGUUGGCCGUG   1
  ******||=|||||||||||||||
targets:2171   CUAUGGGGGUUUCCCAACCGGCAC   2194

2.0 Oryza sativa Japonica Group cDNA clone:J013075K04, full insert sequence NA coding protein psRNATarget