ncRNA ID | osa-miRf11933-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - GCAUGAUACCUCAUAGGUAUCA - NA |
Stem-loop(if miRNA) |
U   A              CAU                A     -------------      UGUUGACAUCAGCAUGA  GAC UCAGCAUGAUACCU   AGGUAUCAGAUCUGAU CCUAU             GUAUCA                 U  ||| ||||||||||||||   |||||||||||||||| |||||             ||||||                 A  CUG AGUCGUACUAUGGA   UCCAUGGUUUAGACUA GGAUG             ACCACG                 C A   A              ---                C     CCUCAUAGUACAA      GCCUCUGUGGUAUAAGC |
Stem-loop sequence | UGACAUCAGCAUGAUACCUCAUAGGUAUCAGAUCUGAUACCUAUGUAUCAUGUUGACAUCAGCAUGAUACCGAAUAUGGUGUCUCCGGCACCAAACAUGAUACUCCGUAGGCAUCAGAUUUGGUACCUAGGUAUCAUGCUGAAGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HI403788.1 |
|
2.5 | Sequence 1913 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB164249.1 |
|
2.5 | Sequence 1913 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ235918.1 |
|
2.5 | Sequence 1913 from Patent EP2985353 | NA | coding protein | psRNATarget |