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BaseInfo

ncRNA ID osa-miRf11919-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GGUUGGUAACACCAACCGGGGAC - NA
Stem-loop(if miRNA)        -                 A   AA    AU  C
UAGUCCC GGUUGGUGUUACCAAUC GGA  AAAG  CG C
||||||| ||||||||||||||||| |||  ||||  || A
AUCAGGG CCAACCACAAUGGUUGG CCU  UUUC  GC U
       G                 C   CA    --  A
Stem-loop sequence UAGUCCCGGUUGGUGUUACCAAUCAGGAAAAAAGAUCGCCAUACGCUUUACUCCCGGUUGGUAACACCAACCGGGGACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289098.1
ncRNA:23   CAGGGGCCAACCACAAUGGUUGG   1
  **=||||||||||*|||||||||
targets:111   ACUCCCGGUUGGUUUUACCAACC   133

1.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
HI404518.1
ncRNA:23   CAGGGGCCAACCACAAUGGUUGG   1
  **||||||||||||*||||||||
targets:50   AGCCCCGGUUGGUGCUACCAACC   72

1.5 Sequence 2643 from Patent EP2074227 NA coding protein psRNATarget
JB164979.1
ncRNA:23   CAGGGGCCAACCACAAUGGUUGG   1
  **||||||||||||*||||||||
targets:50   AGCCCCGGUUGGUGCUACCAACC   72

1.5 Sequence 2643 from Patent EP2559767 NA coding protein psRNATarget
LQ236648.1
ncRNA:23   CAGGGGCCAACCACAAUGGUUGG   1
  **||||||||||||*||||||||
targets:50   AGCCCCGGUUGGUGCUACCAACC   72

1.5 Sequence 2643 from Patent EP2985353 NA coding protein psRNATarget
AK099726.1
ncRNA:23   CAGGGGCCAACCACAAUGGUUGG   1
  **=|=||||||||||||=|||||
targets:1058   AAUCUCGGUUGGUGUUAUCAACC   1080

2.5 Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence NA coding protein psRNATarget
AK061057.1
ncRNA:23   CAGGGGCCAACCACAAUGGUUGG   1
  **=|=||||||||*|||||||||
targets:402   ACUCUCGGUUGGUAUUACCAACC   424

2.5 Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence NA coding protein psRNATarget
AK288624.1
ncRNA:23   CAGGGGCCAACCACAAUGGUUGG   1
  **=*||||||*||||||||||||
targets:4960   AGUACCGGUUAGUGUUACCAACC   4982

1.5 Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence NA coding protein psRNATarget