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BaseInfo

ncRNA ID osa-miRf11904-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CGGUUGGUAAAACCAAUCGGGA - NA
Stem-loop(if miRNA)          G AU        G          GA    A   U
CAAUCUUUA U  CGGUUGGU UUACCAACCG  ACUA AGA C
||||||||| |  |||||||| ||||||||||  |||| |||
GUUAGAAAU A  GCUAACCA AAUGGUUGGC  UGAU UUU U
         G GG        A          UC    A   A
Stem-loop sequence CAAUCUUUAGUAUCGGUUGGUGUUACCAACCGGAACUAAAGAUCUAUUUAUAGUCUCGGUUGGUAAAACCAAUCGGGAGUAAAGAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289098.1
ncRNA:22   AGGGCUAACCAAAAUGGUUGGC   1
  |||||=||||||||||||||||
targets:113   UCCCGGUUGGUUUUACCAACCG   134

1.0 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK289098.1
ncRNA:22   AGGGCUAACCAAAAUGGUUGGC   1
  |||||=|||||*||||||||||
targets:156   UCCCGGUUGGUGUUACCAACCG   177

2.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK288796.1
ncRNA:22   AGGGCUAACCAAAAUGGUUGGC   1
  |||||=|||||*||||||||||
targets:1839   UCCCGGUUGGUGUUACCAACCG   1860

2.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget