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BaseInfo

ncRNA ID	ath-miRf10237-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGCUCGUCUUCGCCGGUUAG - NA
Stem-loop(if miRNA)	UU  G        AGU      G      -  -     --UG     AGA     ----      C CU  CC UGACCGGU   GAUGAG ACGGAU CC UUUUG    GAUUG   CUUUG    CUUGUU A ||  || ||||||||   |||||| |||||| || |||||    |||||   |||||    |||||| A GA  GG AUUGGCCG   CUGCUC UGUCUA GG GGGGC    CUAGC   GAGAC    GAGCGA G   UU  G        CUU      G      A  U     UGUG     --G     AAGA      A
Stem-loop sequence	CUUUCCGUGACCGGUAGUGAUGAGGACGGAUCCUUUUGUGGAUUGAGACUUUGCUUGUUCAAGAAGCGAGAGAACAGAGGCGAUCGUGUCGGGGUGGAAUCUGUGCUCGUCUUCGCCGGUUAGGGUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_117523.4	ncRNA:20   GAUUGGCCGCUUCUGCUCGU   1   |||||||||||||||||||| targets:315   CUAACCGGCGAAGACGAGCA   334 Target Full Sequence	0.0	Arabidopsis thaliana 3-hydroxyacyl-CoA dehydratase 1 (HCD1), mRNA	3-hydroxyacyl-CoA dehydratase 1(HCD1)	coding protein	psRNATarget
AY072398.1	ncRNA:20   GAUUGGCCGCUUCUGCUCGU   1   |||||||||||||||||||| targets:134   CUAACCGGCGAAGACGAGCA   153 Target Full Sequence	0.0	Arabidopsis thaliana carnitine racemase like protein (At4g14440) mRNA, complete cds	NA	coding protein	psRNATarget
BT006275.1	ncRNA:20   GAUUGGCCGCUUCUGCUCGU   1   |||||||||||||||||||| targets:43   CUAACCGGCGAAGACGAGCA   62 Target Full Sequence	0.0	Arabidopsis thaliana At4g14440 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001203115.1	ncRNA:20   GAUUGGCCGCUUCUGCUCGU   1   ||*|||||||||||*||||| targets:1439   CUUACCGGCGAAGAAGAGCA   1458 Target Full Sequence	2.5	Arabidopsis thaliana Phototropic-responsive NPH3 family protein mRNA	Phototropic-responsive NPH3 family protein(AT3G49900)	coding protein	psRNATarget
NM_114850.2	ncRNA:20   GAUUGGCCGCUUCUGCUCGU   1   ||*|||||||||||*||||| targets:1483   CUUACCGGCGAAGAAGAGCA   1502 Target Full Sequence	2.5	Arabidopsis thaliana Phototropic-responsive NPH3 family protein partial mRNA	Phototropic-responsive NPH3 family protein(AT3G49900)	coding protein	psRNATarget
BX826778.1	ncRNA:20   GAUUGGCCGCUUCUGCU-CGU   1   |||||||||||||||||-||| targets:114   CUAACCGGCGAAGACGACGCA   134 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget