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BaseInfo

ncRNA ID	osa-miRf11884-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - ACACGUGGCAGUCCAGUCAGCAU - NA
Stem-loop(if miRNA)	A    C         C         -    A   ---AAAAAU        --ACU   CAGUU   CUUC UACGUGGC CACA GUGGCAGUC AGUCAGCAU AAAA AUA         GGUAGGGC     UGU     CUG    U |||||||| |||| ||||||||| ||||||||| |||| |||         ||||||||     |||     ||| AUGCACCG GUGU CAUCGUCAG UCAGUCGUA UUUU UAU         CCAUCUCG     ACA     GGC    U         C    A         A         A    A   AUAUAUAUU        GGCGU   CCACU   UCUU
Stem-loop sequence	UACGUGGCACACACGUGGCAGUCCAGUCAGCAUAAAAAAUAAAAAAUGGUAGGGCACUUGUCAGUUCUGCUUCUUUUCUCGGUCACCACAUGCGGGCUCUACCUUAUAUAUAUAUAUUUUAAUGCUGACUAGACUGCUACAUGUGCGCCACGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015787374.1	ncRNA:23   UACGACUGACCUGACGGUGCACA   1   |*||||||||||||||||||||| targets:960   ACGCUGACUGGACUGCCACGUGU   982 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277480 (LOC107277480), mRNA	uncharacterized LOC107277480(LOC107277480)	coding protein	psRNATarget
AK108946.1	ncRNA:23   UACGACUGACCUGACGGUGCACA   1   |*||||||||||||||||||||| targets:618   ACGCUGACUGGACUGCCACGUGU   640 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-153-B12, full insert sequence	NA	coding protein	psRNATarget
XM_015755484.1	ncRNA:23   UACGACUGACCUGACGGUGCACA   1   |||||||||||||||||||||** targets:4   AUGCUGACUGGACUGCCACGUAG   26 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein SAR DEFICIENT 1 (LOC4346682), transcript variant X3, mRNA	protein SAR DEFICIENT 1(LOC4346682)	coding protein	psRNATarget
XM_015787187.1	ncRNA:23   UACGACUGACCUGACGGUGCACA   1   ||*||||||||||||=||||||| targets:1037   AUACUGACUGGACUGUCACGUGU   1059 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281343 (LOC107281343), mRNA	uncharacterized LOC107281343(LOC107281343)	coding protein	psRNATarget
AK105139.1	ncRNA:23   UACGACUGACCUGACGGUGCACA   1   ||*|||||||||||||||||||* targets:779   AUACUGACUGGACUGCCACGUGA   801 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-102-F12, full insert sequence	NA	coding protein	psRNATarget
AK120031.1	ncRNA:23   UACGACUGACCUGACGGUGCACA   1   =||*||||||||||||||||*|| targets:2248   GUGGUGACUGGACUGCCACGCGU   2270 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-186-D08, full insert sequence	NA	coding protein	psRNATarget
AK289069.1	ncRNA:23   UACGACUGACCUGACGGUGCACA   1   |*||||||*|||=|||||||||| targets:1630   ACGCUGACCGGAUUGCCACGUGU   1652 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090094F19, full insert sequence	NA	coding protein	psRNATarget