Search result

BaseInfo

ncRNA ID osa-miRf11881-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - ACGAGCUUCAAAAGGCGGCG - NA
Stem-loop(if miRNA)            G GCUAG        --     G --UA    --------AAG  CCAACGCGGAGAGGACGACAAG
CGAGGUCGCCG U     GAGGCUCG  GCUGG C    UCCG           CA                      A
||||||||||| |     ||||||||  ||||| |    ||||           ||                      C
GCUCCGGCGGC G     CUUCGAGC  CGGCC G    AGGU           GC                      G
           G -AAAA        AG     G CAAA    AGUAGCUAAGA  AGCGGCAGUGGUGGCCACUCAA
Stem-loop sequence CGAGGUCGCCGGUGCUAGGAGGCUCGGCUGGGCUAUCCGAAGCACCAACGCGGAGAGGACGACAAGACGAACUCACCGGUGGUGACGGCGACGAGAAUCGAUGAUGGAAAACGGCCGGCGACGAGCUUCAAAAGGCGGCGGCCUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK109830.1
ncRNA:20   GCGGCGGAAAACUUCGAGCA   1
  ||||||=|||*|||||||||
targets:1455   CGCCGCUUUUGGAAGCUCGU   1474

2.5 Oryza sativa Japonica Group cDNA clone:002-148-C02, full insert sequence NA coding protein psRNATarget