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BaseInfo

ncRNA ID	osa-miRf11872-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - ACCGCCGGUGUGUCGCCGGUUAGAC - NA
Stem-loop(if miRNA)	--GUU  C          CA GU      C     U   -C  U        GC GGUCUGACCG  G  AUGCCG CGGUU GAC  GU GCC      || ||||||||||  |  |||||| ||||| |||  || ||U      CG UCAGAUUGGC  C  UGUGGC GCCAG CUG  CG CGU CAAGU  -          CG UG      C     U   AC  U
Stem-loop sequence	GUUGCCGGUCUGACCGCAGGUAUGCCGCCGGUUUGACCGUUGCCUUGCUGCCAGUCUGACCGCCGGUGUGUCGCCGGUUAGACUGCUGAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288214.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ||||||||||||||||||||||||| targets:529   GUCUAACCGGCGACACACCGGCGGU   553 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence	NA	coding protein	psRNATarget
AK107253.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ||||||||||=|||*|||||||||| targets:165   GUCUAACCGGUGACUCACCGGCGGU   189 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-125-G05, full insert sequence	NA	coding protein	psRNATarget
AK107253.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   |||*=|||||||||||||||||||| targets:188   GUCAGACCGGCGACACACCGGCGGU   212 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-125-G05, full insert sequence	NA	coding protein	psRNATarget
AK105847.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ***|==|||*|||||||=||||||| targets:530   UGGUGGCCGCCGACACAUCGGCGGU   554 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-203-G05, full insert sequence	NA	coding protein	psRNATarget
XM_015776521.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ***|==|||*|||||||=||||||| targets:206   UGGUGGCCGCCGACACAUCGGCGGU   230 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group proteasome subunit beta type-2 (LOC4333803), mRNA	proteasome subunit beta type-2(LOC4333803)	coding protein	psRNATarget
AK061228.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ***|==|||*|||||||=||||||| targets:172   UGGUGGCCGCCGACACAUCGGCGGU   196 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-211-A02, full insert sequence	NA	coding protein	psRNATarget
AK099128.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ***|==|||*|||||||=||||||| targets:133   UGGUGGCCGCCGACACAUCGGCGGU   157 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023041C17, full insert sequence	NA	coding protein	psRNATarget
AB026566.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ***|==|||*|||||||=||||||| targets:161   UGGUGGCCGCCGACACAUCGGCGGU   185 Target Full Sequence	2.5	Oryza sativa Japonica Group OsPBD1 mRNA for beta 4 subunit of 20S proteasome, complete cds	NA	coding protein	psRNATarget
CT831628.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ***|==|||*|||||||=||||||| targets:163   UGGUGGCCGCCGACACAUCGGCGGU   187 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029E12, full insert sequence	NA	coding protein	psRNATarget
EF575845.1	ncRNA:25   CAGAUUGGCCGCUGUGUGGCCGCCA   1   ***|==|||*|||||||=||||||| targets:155   UGGUGGCCGCCGACACAUCGGCGGU   179 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) clone OSE-193-288-D12 20S proteasome beta subunit d2 mRNA, complete cds	NA	coding protein	psRNATarget