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BaseInfo

ncRNA ID osa-miRf11857-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - CGCCUGCGAAAAUCGAUCUUCGCA - NA
Stem-loop(if miRNA)     CUA           C           UC AU
CCGC   CGAAGAUUGAU UUUGCAGGCGG  C  A
||||   ||||||||||| |||||||||||  |
GGCG   GCUUCUAGCUA AAGCGUCCGCU  G  U
    AAC           A           GC AA
Stem-loop sequence CCGCCUACGAAGAUUGAUCUUUGCAGGCGGUCCAUAUAAGCGUCGCCUGCGAAAAUCGAUCUUCGCAAGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164746.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  |||||||||||||*||||||||||
targets:119   UGCGAAGAUCGAUCUUCGCAGGCG   142

1.5 Sequence 2410 from Patent EP2559767 NA coding protein psRNATarget
JB164746.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  ||||||||||*||*||||||||||
targets:37   UGCGAAGAUCAAUCUUCGCAGGCG   60

2.5 Sequence 2410 from Patent EP2559767 NA coding protein psRNATarget
JB164746.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  ||||||||||*||*||||||||||
targets:79   UGCGAAGAUCUAUCUUCGCAGGCG   102

2.5 Sequence 2410 from Patent EP2559767 NA coding protein psRNATarget
HI404285.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  |||||||||||||*||||||||||
targets:119   UGCGAAGAUCGAUCUUCGCAGGCG   142

1.5 Sequence 2410 from Patent EP2074227 NA coding protein psRNATarget
HI404285.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  ||||||||||*||*||||||||||
targets:37   UGCGAAGAUCAAUCUUCGCAGGCG   60

2.5 Sequence 2410 from Patent EP2074227 NA coding protein psRNATarget
HI404285.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  ||||||||||*||*||||||||||
targets:79   UGCGAAGAUCUAUCUUCGCAGGCG   102

2.5 Sequence 2410 from Patent EP2074227 NA coding protein psRNATarget
LQ236415.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  |||||||||||||*||||||||||
targets:119   UGCGAAGAUCGAUCUUCGCAGGCG   142

1.5 Sequence 2410 from Patent EP2985353 NA coding protein psRNATarget
LQ236415.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  ||||||||||*||*||||||||||
targets:37   UGCGAAGAUCAAUCUUCGCAGGCG   60

2.5 Sequence 2410 from Patent EP2985353 NA coding protein psRNATarget
LQ236415.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  ||||||||||*||*||||||||||
targets:79   UGCGAAGAUCUAUCUUCGCAGGCG   102

2.5 Sequence 2410 from Patent EP2985353 NA coding protein psRNATarget
AK288572.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  |||*|||||||||*||||||||||
targets:2571   UGCUAAGAUCGAUCUUCGCAGGCG   2594

1.5 Oryza sativa Japonica Group cDNA, clone: J090048G20, full insert sequence NA coding protein psRNATarget
JB164582.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  *|||||||||*||||||||*||||
targets:118   AGCGAAGAUCCAUUUUCGCUGGCG   141

2.5 Sequence 2246 from Patent EP2559767 NA coding protein psRNATarget
LQ236251.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  *|||||||||*||||||||*||||
targets:118   AGCGAAGAUCCAUUUUCGCUGGCG   141

2.5 Sequence 2246 from Patent EP2985353 NA coding protein psRNATarget
HI404121.1
ncRNA:24   ACGCUUCUAGCUAAAAGCGUCCGC   1
  *|||||||||*||||||||*||||
targets:118   AGCGAAGAUCCAUUUUCGCUGGCG   141

2.5 Sequence 2246 from Patent EP2074227 NA coding protein psRNATarget