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BaseInfo

ncRNA ID osa-miRf11856-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UUGGUGCCCGUCACCGAUGAC - NA
Stem-loop(if miRNA)     A  A                       CCAU   A
CGAU AG GUCAUCGGUGAUGGGCAUUAAAG    CUC A
|||| || |||||||||||||||||||||||    |||
GCUA UC CAGUAGCCACUGCCCGUGGUUUU    GAG U
    C  G                       UUCC   C
Stem-loop sequence CGAUAAGAGUCAUCGGUGAUGGGCAUUAAAGCCAUCUCAAUCGAGCCUUUUUUGGUGCCCGUCACCGAUGACGCUCAUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK119390.1
ncRNA:21   CAG-UAGCCACUGCCCGUGGUU   1
  |||-|||*||||||||||||||
targets:3038   GUCCAUCUGUGACGGGCACCAA   3059

3.0 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK107543.1
ncRNA:21   CAGUAGCCACUGCCCGUGGUU   1
  ||||||*|||||||||*||||
targets:1631   GUCAUCUGUGACGGGCCCCAA   1651

2.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget
AK068923.1
ncRNA:21   CAGUAGCCACUGCCCGUGGUU   1
  *|||||*||||||*|||||||
targets:1173   AUCAUCCGUGACGUGCACCAA   1193

2.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
AK068284.1
ncRNA:21   CAGUAGCCACUGCCCGUGGUU   1
  **||||||||||||||||*|*
targets:2280   CACAUCGGUGACGGGCACGAU   2300

2.5 Oryza sativa Japonica Group cDNA clone:J013146I22, full insert sequence NA coding protein psRNATarget