ncRNA ID | osa-miRf11854-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - GGUUGGUGACAUCAAUCGGGA - NA |
Stem-loop(if miRNA) |
U      C          C                     ----UC   A    C       AU  UUAGUC CGGUUGGUGA AUCAAUCGGGACUAAAGAUCA      UUU UAGU CCGGUUG  A  |||||| |||||||||| |||||||||||||||||||||      ||| |||| |||||||  A  AAUCAG GCCAACCAUU UGGUUGGCCCUGAUUUCUAGU      AAA AUCA GGCCAAU  U A      A          A                     UAUAUU   A    A       CA |
Stem-loop sequence | UUUAGUCCCGGUUGGUGACAUCAAUCGGGACUAAAGAUCAUCUUUAUAGUCCCGGUUGAUAAUACUAACCGGAACUAAAAAUUAUAUUGAUCUUUAGUCCCGGUUGGUAUUACCAACCGAGACUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015755226.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA | uncharacterized LOC107278786(LOC107278786) | coding protein | psRNATarget | |||||||||
AK288463.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence | NA | coding protein | psRNATarget |