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BaseInfo

ncRNA ID osa-miRf11853-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGUUGGUGACAUCAAUCGGGA - NA
Stem-loop(if miRNA) U                  UUAA                 CUUCAUCUUUAC    -   UCAU   G  U   U
 GAUCUUUAGUCCCGGUUG    CACUAACCGGGGCUAAA            UCCU GGU    CCC UG CAG A
 ||||||||||||||||||    |||||||||||||||||            |||| |||    ||| || |||
 CUAGAAAUCAGGGCUAAC    GUGGUUGGCCCUGAUUU            AGGA CCG    GGG AC GUC G
A                  UACA                 ----------CU    G   ----   G  U   U
Stem-loop sequence UGAUCUUUAGUCCCGGUUGUUAACACUAACCGGGGCUAAACUUCAUCUUUACUCCUGGUUCAUCCCGUGUCAGUAGUCUGUCAGGGGGCCGAGGAUCUUUAGUCCCGGUUGGUGACAUCAAUCGGGACUAAAGAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015755226.1
ncRNA:21   AGGGCUAACUACAGUGGUUGG   1
  |||||=|||||||=|||||||
targets:79   UCCCGGUUGAUGUUACCAACC   99

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA uncharacterized LOC107278786(LOC107278786) coding protein psRNATarget
AK288463.1
ncRNA:21   AGGGCUAACUACAGUGGUUGG   1
  |||||=|||=|||||||||||
targets:564   UCCCGGUUGGUGUCACCAACC   584

2.5 Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence NA coding protein psRNATarget