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BaseInfo

ncRNA ID osa-miRf11851-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCCUCCGCCAGCGAAAAUGU - NA
Stem-loop(if miRNA)    C    G              CC GC    CCCA  -         A
GGC AAAG GUUUUCGCUGGCGG  G  UUUG    CC CUAGCGAAA C
||| |||| ||||||||||||||  |  ||||    || ||||||||| U
UCG UUUU UAAAAGCGACCGCC  C  AGAC    GG GAUCGCUUU A
   C    G              UC UA    ACCC  C         U
Stem-loop sequence GGCCAAAGGGUUUUCGCUGGCGGCCGGCUUUGCCCACCCUAGCGAAAACUAUUUUCGCUAGCGGCCCACAGAAUCCUCCGCCAGCGAAAAUGUUUUCGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT831288.1
ncRNA:20   UGUAAAAGCGACCGCCUCCU   1
  |||||*|||*||||||||||
targets:1043   ACAUUGUCGGUGGCGGAGGA   1062

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F06, full insert sequence NA coding protein psRNATarget
AK109557.1
ncRNA:20   UGUAAAAGCGACCGCCUCCU   1
  |||||*|||*||||||||||
targets:1058   ACAUUGUCGGUGGCGGAGGA   1077

2.5 Oryza sativa Japonica Group cDNA clone:002-125-D08, full insert sequence NA coding protein psRNATarget
XM_015791651.1
ncRNA:20   UGUAAAAGCGACCGCCUCCU   1
  |||||*|||*||||||||||
targets:1094   ACAUUGUCGGUGGCGGAGGA   1113

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343571 (LOC4343571), mRNA uncharacterized LOC4343571(LOC4343571) coding protein psRNATarget