ncRNA ID | osa-miRf11851-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UCCUCCGCCAGCGAAAAUGU - NA |
Stem-loop(if miRNA) |
   C    G              CC GC    CCCA  -         A GGC AAAG GUUUUCGCUGGCGG  G  UUUG    CC CUAGCGAAA C ||| |||| ||||||||||||||  |  ||||    || ||||||||| U UCG UUUU UAAAAGCGACCGCC  C  AGAC    GG GAUCGCUUU A    C    G              UC UA    ACCC  C         U |
Stem-loop sequence | GGCCAAAGGGUUUUCGCUGGCGGCCGGCUUUGCCCACCCUAGCGAAAACUAUUUUCGCUAGCGGCCCACAGAAUCCUCCGCCAGCGAAAAUGUUUUCGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT831288.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F06, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK109557.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-125-D08, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015791651.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343571 (LOC4343571), mRNA | uncharacterized LOC4343571(LOC4343571) | coding protein | psRNATarget |