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BaseInfo

ncRNA ID ath-miRf10233-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CUACUCGACCAAGGGGUCGUG - NA
Stem-loop(if miRNA)     -       GG              G    -   --GAA G -- GAAAAGUGGAGAUGGUGU
UACU CGACCCU  GGUCGAGUGGCAGU AUCG AGU     U G  C                  U
|||| |||||||  |||||||||||||| |||| |||     | |  |                  A
GUGG GCUGGGG  CCAGCUCAUCGUCA UAGU UCA     U G  G                  C
    U       AA              G    G   AAGAG G UG UGAGCUGGCGGACCAGCU
Stem-loop sequence UACUCGACCCUGGGGUCGAGUGGCAGUGAUCGAGUGAAUGGCGAAAAGUGGAGAUGGUGUUACUCGACCAGGCGGUCGAGUGGUGGUGAGAAACUGUGAUGACUGCUACUCGACCAAGGGGUCGUGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:21   GUGCUGGGGAACCAGCUCAUC   1
  |*|||||=|||||||||||=|
targets:2017   CUCGACCUCUUGGUCGAGUGG   2037

2.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
AY231407.1
ncRNA:21   GUGCUGGGGAACCAGCUCAUC   1
  |*|||||||*||||||||||*
targets:586   CYCGACCCCCUGGUCGAGUAU   606

2.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
BT015478.1
ncRNA:21   GUGCUGGGGAACCAGCUCAUC   1
  |*|||||||*||||||||||*
targets:184   CUCGACCCCCUGGUCGAGUAU   204

2.5 Arabidopsis thaliana At4g05636 mRNA sequence NA coding protein psRNATarget
BT014714.1
ncRNA:21   GUGCUGGGGAACCAGCUCAUC   1
  |*|||||||*||||||||||*
targets:184   CUCGACCCCCUGGUCGAGUAU   204

2.5 Arabidopsis thaliana At4g05636.1 mRNA sequence NA coding protein psRNATarget
BT025674.1
ncRNA:21   GUGCUGGGGAACCAGCUCAUC   1
  |*|||||||*||||||||||*
targets:311   CUCGACCCCCUGGUCGAGUAU   331

2.5 Arabidopsis thaliana NA coding protein psRNATarget