ncRNA ID | ath-miRf10233-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CUACUCGACCAAGGGGUCGUG - NA |
Stem-loop(if miRNA) |
    -       GG              G    -   --GAA G -- GAAAAGUGGAGAUGGUGU UACU CGACCCU  GGUCGAGUGGCAGU AUCG AGU     U G  C                  U |||| |||||||  |||||||||||||| |||| |||     | |  |                  A GUGG GCUGGGG  CCAGCUCAUCGUCA UAGU UCA     U G  G                  C     U       AA              G    G   AAGAG G UG UGAGCUGGCGGACCAGCU |
Stem-loop sequence | UACUCGACCCUGGGGUCGAGUGGCAGUGAUCGAGUGAAUGGCGAAAAGUGGAGAUGGUGUUACUCGACCAGGCGGUCGAGUGGUGGUGAGAAACUGUGAUGACUGCUACUCGACCAAGGGGUCGUGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183005.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY231407.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT015478.1 |
|
2.5 | Arabidopsis thaliana At4g05636 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT014714.1 |
|
2.5 | Arabidopsis thaliana At4g05636.1 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT025674.1 |
|
2.5 | Arabidopsis thaliana | NA | coding protein | psRNATarget |