ncRNA ID | osa-miRf11848-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GCGAGAUGUUUCUCCCUUCG - NA |
Stem-loop(if miRNA) |
         G      ---            C --G G      CU     ----C  -- GGGGAGGAGGAGGACUGGCCCAUCUUCUUCCUUC GGCCAAAGC AGAUGU   UUCUCCCUUCGG G   G UUUGCA  GCGGU     GA  G                                  C ||||||||| ||||||   |||||||||||| |   | ||||||  |||||     ||  | CCGGUUUCG UCUACG   AAGAGGGAAGCC C   C GAACGU  CGCCG     GA  G                                  U          G      AAA            A AAA G      -U     CCGUU  UU UGUUUCCCUCCCCCCUUCCUUCUUUCUCUCCCUC |
Stem-loop sequence | GGCCAAAGCGAGAUGUUUCUCCCUUCGGCGGGGUUUGCACUGCGGUCGAGGGGGAGGAGGAGGACUGGCCCAUCUUCUUCCUUCCUCUCCCUCUCUUUCUUCCUUCCCCCCUCCCUUUGUGUUAGUUGCCGCCGCUUGCAAGGCAAACACCGAAGGGAGAAAAAGCAUCUGGCUUUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015786625.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107275902 (LOC107275902), mRNA | uncharacterized LOC107275902(LOC107275902) | coding protein | psRNATarget |