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BaseInfo

ncRNA ID osa-miRf11848-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GCGAGAUGUUUCUCCCUUCG - NA
Stem-loop(if miRNA)          G      ---            C --G G      CU     ----C  -- GGGGAGGAGGAGGACUGGCCCAUCUUCUUCCUUC
GGCCAAAGC AGAUGU   UUCUCCCUUCGG G   G UUUGCA  GCGGU     GA  G                                  C
||||||||| ||||||   |||||||||||| |   | ||||||  |||||     ||  |
CCGGUUUCG UCUACG   AAGAGGGAAGCC C   C GAACGU  CGCCG     GA  G                                  U
         G      AAA            A AAA G      -U     CCGUU  UU UGUUUCCCUCCCCCCUUCCUUCUUUCUCUCCCUC
Stem-loop sequence GGCCAAAGCGAGAUGUUUCUCCCUUCGGCGGGGUUUGCACUGCGGUCGAGGGGGAGGAGGAGGACUGGCCCAUCUUCUUCCUUCCUCUCCCUCUCUUUCUUCCUUCCCCCCUCCCUUUGUGUUAGUUGCCGCCGCUUGCAAGGCAAACACCGAAGGGAGAAAAAGCAUCUGGCUUUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015786625.1
ncRNA:20   GCUUCCCUCUUUGUAGAGCG   1
  |||**||||||||||||||*
targets:562   CGACUGGAGAAACAUCUCGA   581

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107275902 (LOC107275902), mRNA uncharacterized LOC107275902(LOC107275902) coding protein psRNATarget