Search result

BaseInfo

ncRNA ID	osa-miRf11844-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UCAGCGCCAUGCUAUUUGGCGCUG - NA
Stem-loop(if miRNA)	C  CA C            ------   -- GCCACCGUGGAU UAGACACCUCAGCGCCA GU  C UGGCGCUGAAUG      CCG  U            G ||||||||||||||||| ||  | ||||||||||||      |||  |            G AUCUGUGGAGUCGCGGU UA  G ACCGCGACUUAC      CCG  C            A                  U  UC U            AUGCAA   UG GACUGAGUCGGA
Stem-loop sequence	UAGACACCUCAGCGCCACGUCACCUGGCGCUGAAUGCCGUGCCACCGUGGAUGGAAGGCUGAGUCAGCGUGCCAACGUACAUUCAGCGCCAUGCUAUUUGGCGCUGAGGUGUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015766258.1	ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1   |||||||||||||=|||||||||| targets:1120   CAGCGCCAAAUAGUAUGGCGCUGA   1143 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
AK105004.2	ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1   |||||||||||||=|||||||||| targets:295   CAGCGCCAAAUAGUAUGGCGCUGA   318 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015770637.1	ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1   |||||*|||||||||||||||||| targets:413   CAGCGGCAAAUAGCAUGGCGCUGA   436 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770638.1	ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1   |||||*|||||||||||||||||| targets:413   CAGCGGCAAAUAGCAUGGCGCUGA   436 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget