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BaseInfo

ncRNA ID osa-miRf11842-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUUCCGUCCGCCUUGAUCGC - NA
Stem-loop(if miRNA)     A  C     C                         AGCAA  CACGCGAUAUGGUAUUUGUACCCCUCAUUGU
UCUC AU GUUUU CGUCCGCCUUGAUCGCUAUUGACCU     CG                               C
|||| || ||||| |||||||||||||||||||||||||     ||
AGAG UA CAAAA GCAGGCGGAACUAGCGAUAACUGGG     CC                               A
    C  A     A                         ----C  AAGAUCGGGAGUGUUCAUGUUCAUCUUACAU
Stem-loop sequence UCUCAAUCGUUUUCCGUCCGCCUUGAUCGCUAUUGACCUAGCAACGCACGCGAUAUGGUAUUUGUACCCCUCAUUGUCAUACAUUCUACUUGUACUUGUGAGGGCUAGAACCCGGGUCAAUAGCGAUCAAGGCGGACGAAAAACAAUCGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015772668.1
ncRNA:20   CGCUAGUUCCGCCUGCCUUU   1
  *||||||||*||||||||||
targets:1142   ACGAUCAAGACGGACGGAAA   1161

1.5 PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B-like (LOC107277991), mRNA mitotic-spindle organizing protein 1B-like(LOC107277991) coding protein psRNATarget
XM_015759864.1
ncRNA:20   CGCUAGUUCCGCCUGCCUUU   1
  *||||||||*||||||||||
targets:1142   ACGAUCAAGACGGACGGAAA   1161

1.5 PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B (LOC4333190), mRNA mitotic-spindle organizing protein 1B(LOC4333190) coding protein psRNATarget