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BaseInfo

ncRNA ID	osa-miRf11841-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CGUGCGCGCGAAAAACGAGGG - NA
Stem-loop(if miRNA)	U             C   A            A     --    --AAA    UUGCC       -  C  UGAAAAGCGUGCG GCG AAAACGAGGGAG UGGGU  GGAA     GGGG     GAACACA CC U  ||||||||||||| ||| |||||||||||| |||||  ||||     ||||     ||||||| ||  ACUUUUCGCACGU CGU UUUUGCUCCCUC ACCCA  CCUU     CUCC     CUUGUGU GG U A             A   C            C     AC    GGGUA    ---UU       C  A
Stem-loop sequence	UUGAAAAGCGUGCGCGCGAAAAACGAGGGAGAUGGGUGGAAAAAGGGGUUGCCGAACACACCCUUAGGCUGUGUUCUUCCUCAUGGGUUCCCAACCCACCUCCCUCGUUUUCUGCAUGCACGCUUUUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015791501.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   |=||||||||||||||||||| targets:1956   CUCUCGUUUUUCGCGCGCACG   1976 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342799 (LOC4342799), transcript variant X3, mRNA	uncharacterized LOC4342799(Os07g0238800)	coding protein	psRNATarget
AK101492.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   |=||||||||||||||||||| targets:1943   CUCUCGUUUUUCGCGCGCACG   1963 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J033042P14, full insert sequence	NA	coding protein	psRNATarget
XM_015763987.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   |||||||||||||||=||||| targets:1476   CCCUCGUUUUUCGCGUGCACG   1496 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF023 (LOC9270132), mRNA	ethylene-responsive transcription factor ERF023(LOC9270132)	coding protein	psRNATarget
AK287544.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   |||||||||||||||=||||| targets:1447   CCCUCGUUUUUCGCGUGCACG   1467 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065016L10, full insert sequence	NA	coding protein	psRNATarget
AK241141.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   |=||||||||||||||||||| targets:788   CUCUCGUUUUUCGCGCGCACG   808 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J065099M17, full insert sequence	NA	coding protein	psRNATarget
AK242569.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   ||||||||||*|||||||||| targets:1096   CCCUCGUUUUCCGCGCGCACG   1116 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090006F23, full insert sequence	NA	coding protein	psRNATarget
AK063697.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   ||||||||||*|||||||||| targets:517   CCCUCGUUUUCCGCGCGCACG   537 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-119-G04, full insert sequence	NA	coding protein	psRNATarget
AK106772.1	ncRNA:21   GGGA---GCAAAAAGCGCGCGUGC   1   |=||---||||||||||||||||| targets:1648   CUCUGACCGUUUUUCGCGCGCACG   1671 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-115-G01, full insert sequence	NA	coding protein	psRNATarget
CT836255.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   |||||||*|||||||=||||| targets:509   CCCUCGUGUUUCGCGUGCACG   529 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109M12, full insert sequence	NA	coding protein	psRNATarget
XM_015761971.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   **||||||||*|||||||||| targets:3312   GACUCGUUUUCCGCGCGCACG   3332 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 2 (LOC4350826), transcript variant X1, mRNA	putative disease resistance RPP13-like protein 2(LOC4350826)	coding protein	psRNATarget
AK068168.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   **||||||||*|||||||||| targets:3260   GACUCGUUUUCCGCGCGCACG   3280 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013129H24, full insert sequence	NA	coding protein	psRNATarget
AK119494.1	ncRNA:21   GGGAGCAAAAAGCGCGCGUGC   1   *==|||||||*|||||||||| targets:726   GUUUCGUUUUCCGCGCGCACG   746 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-134-D10, full insert sequence	NA	coding protein	psRNATarget