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BaseInfo

ncRNA ID osa-miRf11839-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CGGUCAGACCAGCCUGAGGCGU - NA
Stem-loop(if miRNA)   AA  UA     GG  C C    A     GC   A A    ----C    A       - A
UC  AC  GCGCU  AG C GGUC GACCG  CGU G CCAU     GGUC GACCGGC C G
||  ||  |||||  || | |||| |||||  ||| | ||||     |||| ||||||| |
AG  UG  UGCGG  UC G CCAG CUGGC  GCA C GGUG     CCAG CUGGCCG G A
  GC  GC     AG  C A    A     --   - -    UACAA    A       C C
Stem-loop sequence UCAAACUAGCGCUGGAGCCCGGUCAGACCGGCCGUAGACCAUCGGUCAGACCGGCCAGACGCGCCGGUCAGACCAACAUGUGGCACGCGGUCAGACCAGCCUGAGGCGUCGGUCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288317.1
ncRNA:22   UGCGGAGUCCGACCAGACUGGC   1
  =*||||=||||*||||||||||
targets:1357   GGGCCUUAGGCCGGUCUGACCG   1378

2.5 Oryza sativa Japonica Group cDNA, clone: J090021K08, full insert sequence NA coding protein psRNATarget