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BaseInfo

ncRNA ID	osa-miRf11835-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - AGAGGGCCCACAUGUCAGUGAU - NA
Stem-loop(if miRNA)	GA                G  A   A   U A UCUGACUUU  GUCACUGACAUGUGGG CC CUG CUU G G |||||||||  |||||||||||||||| || ||| ||| | U AGAUUGAAA  UAGUGACUGUACACCC GG GAU GAG C C          -A                G  A   -   C A
Stem-loop sequence	UCUGACUUUGAGUCACUGACAUGUGGGGCCACUGACUUUGAGUCACCGAGUAGAGGGCCCACAUGUCAGUGAUAAAAGUUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT829264.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||||||||||||||||||||* targets:81   CUCACUGACAUGUGGGCCCUCC   102 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN125P11, full insert sequence	NA	coding protein	psRNATarget
XM_015787624.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||||||||||||||||||||* targets:75   CUCACUGACAUGUGGGCCCUCC   96 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278582 (LOC107278582), mRNA	uncharacterized LOC107278582(LOC107278582)	coding protein	psRNATarget
XM_015781541.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *|||||||||||||||||||*| targets:901   CUCACUGACAUGUGGGCCCUAU   922 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group UMP-CMP kinase 2 (LOC4334909), transcript variant X3, mRNA	UMP-CMP kinase 2(LOC4334909)	coding protein	psRNATarget
XM_015781539.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *|||||||||||||||||||*| targets:909   CUCACUGACAUGUGGGCCCUAU   930 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group UMP-CMP kinase 2 (LOC4334909), transcript variant X1, mRNA	UMP-CMP kinase 2(LOC4334909)	coding protein	psRNATarget
XM_015781540.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *|||||||||||||||||||*| targets:908   CUCACUGACAUGUGGGCCCUAU   929 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group UMP-CMP kinase 2 (LOC4334909), transcript variant X2, mRNA	UMP-CMP kinase 2(LOC4334909)	coding protein	psRNATarget
CT829598.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   =|||||||*|||||||=||||| targets:1915   GUCACUGAGAUGUGGGUCCUCU   1936 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA206P24, full insert sequence	NA	coding protein	psRNATarget
XM_015793999.1	ncRNA:22   UAGUGACUGUACACCC-GGGAGA   1   **||||||||||||||-|||||| targets:21   CCCACUGACAUGUGGGGCCCUCU   43 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9272620 (LOC9272620), mRNA	uncharacterized LOC9272620(LOC9272620)	coding protein	psRNATarget
AK067022.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||=*||||||||||||||||* targets:147   UUCGAUGACAUGUGGGCCCUCA   168 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013090K12, full insert sequence	NA	coding protein	psRNATarget
AK104753.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||=*||||||||||||||||* targets:112   UUCGAUGACAUGUGGGCCCUCA   133 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:001-038-F08, full insert sequence	NA	coding protein	psRNATarget
AK109436.2	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||=*||||||||||||||||* targets:112   UUCGAUGACAUGUGGGCCCUCA   133 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:006-309-G11, full insert sequence	NA	coding protein	psRNATarget
CT829669.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||=*||||||||||||||||* targets:149   UUCGAUGACAUGUGGGCCCUCA   170 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113D04, full insert sequence	NA	coding protein	psRNATarget
XM_015765752.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||=*||||||||||||||||* targets:297   UUCGAUGACAUGUGGGCCCUCA   318 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group alanine--tRNA ligase (LOC4326034), mRNA	alanine--tRNA ligase(LOC4326034)	coding protein	psRNATarget
CT831303.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   *||=*||||||||||||||||* targets:302   UUCGAUGACAUGUGGGCCCUCA   323 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107N03, full insert sequence	NA	coding protein	psRNATarget
AK106328.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   =*|||||||||||||||||*|* targets:499   GGCACUGACAUGUGGGCCCGCC   520 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-101-F04, full insert sequence	NA	coding protein	psRNATarget
AK106349.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   =*|||*|||||||||||||||* targets:15   GCCACCGACAUGUGGGCCCUCA   36 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-101-H09, full insert sequence	NA	coding protein	psRNATarget
XM_015779261.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   =*|||*|||||||||||||||* targets:49   GCCACCGACAUGUGGGCCCUCA   70 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group UPF0301 protein Cpar_0662 (LOC4324886), mRNA	UPF0301 protein Cpar_0662(LOC4324886)	coding protein	psRNATarget
XM_015758257.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   **|||||||||||||||||*|* targets:151   CCCACUGACAUGUGGGCCCACA   172 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein FAR1-RELATED SEQUENCE 5-like (LOC107278009), mRNA	protein FAR1-RELATED SEQUENCE 5-like(LOC107278009)	coding protein	psRNATarget
CT831561.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   =*|||*|||||||||||||||* targets:17   GCCACCGACAUGUGGGCCCUCA   38 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI223A09, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:22   UAGUGACUGUACACCCGGGAGA   1   |**|||||||||||||||||** targets:4119   AGGACUGACAUGUGGGCCCUGC   4140 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget