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BaseInfo

ncRNA ID osa-miRf11831-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGGUCAACACCGCCAUGUAG - NA
Stem-loop(if miRNA)     CA       A             A  C         ----------C    CA  AUAUAUAUAUGACCCAUU
GUGG  CCUACAU GCGGUGUUGACCU GU UUUGUUCCA           GUGG  UU                  U
||||  ||||||| ||||||||||||| || |||||||||           ||||  ||
CACC  GGAUGUA CGCCACAACUGGA CA AAACAGGGU           GGGU  UU                  A
    AC       C             C  U         ACAGUUACCCA    -G  UAUAAAAACCCACUUACU
Stem-loop sequence GUGGCACCUACAUAGCGGUGUUGACCUAGUCUUUGUUCCACGUGGCAUUAUAUAUAUAUGACCCAUUUAUCAUUCACCCAAAAAUAUUUGUGGGACCCAUUGACAUGGGACAAAUACCAGGUCAACACCGCCAUGUAGGCACCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015773729.1
ncRNA:20   GAUGUACCGCCACAACUGGA   1
  |||||*|||||||*||||||
targets:584   CUACAGGGCGGUGCUGACCU   603

2.5 PREDICTED: Oryza sativa Japonica Group probable protein kinase At2g41970 (LOC4332124), mRNA probable protein kinase At2g41970(LOC4332124) coding protein psRNATarget
AK111731.1
ncRNA:20   GAUGUACCGCCACAACUGGA   1
  |||||*|||||||*||||||
targets:497   CUACAGGGCGGUGCUGACCU   516

2.5 Oryza sativa Japonica Group cDNA clone:J023038I10, full insert sequence NA coding protein psRNATarget