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BaseInfo

ncRNA ID osa-miRf11828-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GUUGGUAACUCCAACCGGGAC - NA
Stem-loop(if miRNA)       A          UU                   AA
AUCUUU GUCCCGGUUG  GUUACCAACCGGGACUAAA  U
|||||| ||||||||||  |||||||||||||||||||  C
UAGAAA CAGGGCCAAC  CAAUGGUUGGCCCUGAUUU  A
      A          CU                   CU
Stem-loop sequence AUCUUUAGUCCCGGUUGUUGUUACCAACCGGGACUAAAAAUCAUCUUUAGUCCCGGUUGGUAACUCCAACCGGGACAAAAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288377.1
ncRNA:21   CAGGGCCAACCUCAAUGGUUG   1
  |||||||||||*|||||||||
targets:1384   GUCCCGGUUGGUGUUACCAAC   1404

1.5 Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence NA coding protein psRNATarget
AK289098.1
ncRNA:21   CAGGGCCAACCUCAAUGGUUG   1
  |||||||||||*|||||||||
targets:155   GUCCCGGUUGGUGUUACCAAC   175

1.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK288796.1
ncRNA:21   CAGGGCCAACCUCAAUGGUUG   1
  |||||||||||*|||||||||
targets:1838   GUCCCGGUUGGUGUUACCAAC   1858

1.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
AK288405.1
ncRNA:21   CAGGGCCAACCUCAAUGGUUG   1
  |||||*|||||*|||||||||
targets:2396   GUCCCCGUUGGUGUUACCAAC   2416

2.5 Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence NA coding protein psRNATarget