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BaseInfo

ncRNA ID	osa-miRf11827-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - AGUCCUGGUUGGUAACACCAAC - NA
Stem-loop(if miRNA)	U    CC           CU           AA   UC  UAGU  CGGUUGGUGUU  CAACCGGGACU  AGA  U  ||||  |||||||||||  |||||||||||  |||  AUCA  GUCAACCACAA  GUUGGUCCUGA  UCU  A A    AA           UG           --   UU
Stem-loop sequence	UUAGUCCCGGUUGGUGUUCUCAACCGGGACUAAAGAUCUAUUUCUAGUCCUGGUUGGUAACACCAACUGAAACUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288405.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ||||||||||||||||=||||| targets:2402   GUUGGUGUUACCAACCGGGACU   2423 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ||||||||||||||||*||||| targets:1390   GUUGGUGUUACCAACCUGGACU   1411 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ||||||||*||||||||||||| targets:569   GUUGGUGUCACCAACCAGGACU   590 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||*|||||||||||||||||| targets:4967   GUUAGUGUUACCAACCAGGACU   4988 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
JB164747.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||*||||||=||||||||||| targets:56   GUUAGUGUUAUCAACCAGGACU   77 Target Full Sequence	2.5	Sequence 2411 from Patent EP2559767	NA	coding protein	psRNATarget
HI404286.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||*||||||=||||||||||| targets:56   GUUAGUGUUAUCAACCAGGACU   77 Target Full Sequence	2.5	Sequence 2411 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236416.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||*||||||=||||||||||| targets:56   GUUAGUGUUAUCAACCAGGACU   77 Target Full Sequence	2.5	Sequence 2411 from Patent EP2985353	NA	coding protein	psRNATarget
HI404518.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||||||*||||||||=||||| targets:57   GUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
JB164979.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||||||*||||||||=||||| targets:57   GUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||||||*||||||||=||||| targets:57   GUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||*||||||||||||=||||| targets:920   GUUUGUGUUACCAACCGGGACU   941 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK289098.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ||||||*|||||||||=||||| targets:118   GUUGGUUUUACCAACCGGGACU   139 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   |||*||||||||||||=||||| targets:2395   GUUAGUGUUACCAACCGGGACU   2416 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK065349.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   **||*|*||||||||||||||| targets:2316   AAUGAUCUUACCAACCAGGACU   2337 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013022H13, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ||||||*|||||||||||*||| targets:409   GUUGGUAUUACCAACCAGAACU   430 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
XM_015755256.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ***|||||||||||||=||||| targets:65   UCCGGUGUUACCAACCGGGACU   86 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget
XM_015779829.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ||||||***||||||||||||| targets:1714   GUUGGUAACACCAACCAGGACU   1735 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK121178.1	ncRNA:22   CAACCACAAUGGUUGGUCCUGA   1   ||*|*|||||||||||*||||| targets:1990   GUCGAUGUUACCAACCCGGACU   2011 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget