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BaseInfo

ncRNA ID	osa-miRf11824-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGAUACCUACCAGGUAUCAU - NA
Stem-loop(if miRNA)	UAC        C UA   A  A AGAAUCGUAUGAUACCU   AGGUAUCA C  AUA CU G |||||||||||||||||   |||||||| |  ||| || UCUUAGCGUACUAUGGA   UCCAUAGU G  UAU GG C                  CCA        A GC   -  U
Stem-loop sequence	AGAAUCGUAUGAUACCUUACAGGUAUCACCUAAUAACUAGCUGGUAUCGGAUGAUACCUACCAGGUAUCAUGCGAUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK110723.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *|||||=||||||||||||| targets:622   CUGAUAUCUGGUAGGUAUCA   641 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-170-E02, full insert sequence	NA	coding protein	psRNATarget
AK110723.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *|||||||||*||||||||| targets:685   CUGAUACCUGAUAGGUAUCA   704 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-170-E02, full insert sequence	NA	coding protein	psRNATarget
AK110723.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *|||||=|||*||||||||| targets:748   CUGAUAUCUGAUAGGUAUCA   767 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-170-E02, full insert sequence	NA	coding protein	psRNATarget
AK070511.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   =||||||||||*|||||||| targets:1153   GUGAUACCUGGGAGGUAUCA   1172 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023057E03, full insert sequence	NA	coding protein	psRNATarget
AK070511.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   =|||*||||||*|||||||| targets:1069   GUGAAACCUGGGAGGUAUCA   1088 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023057E03, full insert sequence	NA	coding protein	psRNATarget
XM_015774293.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   =||||||||||*|||||||| targets:1244   GUGAUACCUGGGAGGUAUCA   1263 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 8.3 (LOC9272592), transcript variant X4, mRNA	protein NRT1/ PTR FAMILY 8.3(LOC9272592)	coding protein	psRNATarget
XM_015774293.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   =|||*||||||*|||||||| targets:1160   GUGAAACCUGGGAGGUAUCA   1179 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 8.3 (LOC9272592), transcript variant X4, mRNA	protein NRT1/ PTR FAMILY 8.3(LOC9272592)	coding protein	psRNATarget
XM_015774294.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   =||||||||||*|||||||| targets:1322   GUGAUACCUGGGAGGUAUCA   1341 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 8.3 (LOC9272592), transcript variant X5, mRNA	protein NRT1/ PTR FAMILY 8.3(LOC9272592)	coding protein	psRNATarget
XM_015774294.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   =|||*||||||*|||||||| targets:1238   GUGAAACCUGGGAGGUAUCA   1257 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 8.3 (LOC9272592), transcript variant X5, mRNA	protein NRT1/ PTR FAMILY 8.3(LOC9272592)	coding protein	psRNATarget
XM_015758963.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *||||||||||||*|||||= targets:818   CUGAUACCUGGUAAGUAUCG   837 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4349031 (LOC4349031), mRNA	uncharacterized LOC4349031(LOC4349031)	coding protein	psRNATarget
XM_015782244.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *|||||=|||*||||||||| targets:16   CUGAUAUCUGAUAGGUAUCA   35 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 88F3 (LOC4339387), mRNA	UDP-glycosyltransferase 88F3(LOC4339387)	coding protein	psRNATarget
JB164190.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *|||*|||||*||||||||| targets:128   CUGACACCUGAUAGGUAUCA   147 Target Full Sequence	2.5	Sequence 1854 from Patent EP2559767	NA	coding protein	psRNATarget
HI403729.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *|||*|||||*||||||||| targets:128   CUGACACCUGAUAGGUAUCA   147 Target Full Sequence	2.5	Sequence 1854 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235859.1	ncRNA:20   UACUAUGGACCAUCCAUAGU   1   *|||*|||||*||||||||| targets:128   CUGACACCUGAUAGGUAUCA   147 Target Full Sequence	2.5	Sequence 1854 from Patent EP2985353	NA	coding protein	psRNATarget