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BaseInfo

ncRNA ID osa-miRf11820-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AUGACUCAUCUCUGACGGGUU - NA
Stem-loop(if miRNA) U  UC        C                   U    UAA
 UG  ACCCGUCA AGAUGAGUCAUCAGUGACG GUCG   C
 ||  |||||||| ||||||||||||||||||| ||||
 AU  UGGGCAGU UCUACUCAGUAGUCACUGC CAGU   U
A  GU        C                   -    CCA
Stem-loop sequence UUGUCACCCGUCACAGAUGAGUCAUCAGUGACGUGUCGUAACUACCUGACCGUCACUGAUGACUCAUCUCUGACGGGUUGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK063612.1
ncRNA:21   UUGGGCAGUCUCUACUCAGUA   1
  |||=|||||*|||||||||||
targets:939   AACUCGUCAAAGAUGAGUCAU   959

2.5 Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence NA coding protein psRNATarget
XM_015763577.1
ncRNA:21   UUGGGCAGUCUCUACUCAGUA   1
  *||||||||*|||||||||||
targets:1455   CACCCGUCACAGAUGAGUCAU   1475

1.5 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605) coding protein psRNATarget