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BaseInfo

ncRNA ID osa-miRf11815-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GCUGGCAAUGGCAGAUUGGCAGU - NA
Stem-loop(if miRNA)     ---    G       G     C       GUG    -  -    U    CU
CCCU   UGCA UGCUAGU UGCUA UGCUAGU   CUUA CA CUAC GCUA  A
||||   |||| ||||||| ||||| |||||||   |||| || |||| ||||  C
GGGA   ACGU ACGGUUA ACGGU ACGGUCG   GAGU GU GAUG CGAU  U
    AGG    G       G     A       ---    C  C    U    CA
Stem-loop sequence CCCUUGCAGUGCUAGUGUGCUACUGCUAGUGUGCUUACACUACUGCUACUACUACUAGCUGUAGCUGCUGAGGCUGGCAAUGGCAGAUUGGCAGUGCAGGAAGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107504.1
ncRNA:23   UGA-CGGUUAGACGGUAACGGUCG   1
  |||-||||||=|||||||||||*|
targets:34   ACUUGCCAAUUUGCCAUUGCCAAC   57

2.5 Oryza sativa Japonica Group cDNA clone:002-129-E04, full insert sequence NA coding protein psRNATarget
XM_015783362.1
ncRNA:23   UGA-CGGUUAGACGGUAACGGUCG   1
  |||-||||||=|||||||||||*|
targets:89   ACUUGCCAAUUUGCCAUUGCCAAC   112

2.5 PREDICTED: Oryza sativa Japonica Group transcription repressor OFP1 (LOC4338423), mRNA transcription repressor OFP1(LOC4338423) coding protein psRNATarget
AK062436.1
ncRNA:23   UGACGGUUAGACGGUAACGGUCG   1
  *=||||||*=||||||||||||*
targets:421   CUUGCCAAGUUGCCAUUGCCAGA   443

3.0 Oryza sativa Japonica Group cDNA clone:001-103-A05, full insert sequence NA coding protein psRNATarget