ncRNA ID | osa-miRf11815-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - GCUGGCAAUGGCAGAUUGGCAGU - NA |
Stem-loop(if miRNA) |
    ---    G       G     C       GUG    -  -    U    CU CCCU   UGCA UGCUAGU UGCUA UGCUAGU   CUUA CA CUAC GCUA  A ||||   |||| ||||||| ||||| |||||||   |||| || |||| ||||  C GGGA   ACGU ACGGUUA ACGGU ACGGUCG   GAGU GU GAUG CGAU  U     AGG    G       G     A       ---    C  C    U    CA |
Stem-loop sequence | CCCUUGCAGUGCUAGUGUGCUACUGCUAGUGUGCUUACACUACUGCUACUACUACUAGCUGUAGCUGCUGAGGCUGGCAAUGGCAGAUUGGCAGUGCAGGAAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK107504.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-129-E04, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015783362.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group transcription repressor OFP1 (LOC4338423), mRNA | transcription repressor OFP1(LOC4338423) | coding protein | psRNATarget | |||||||||
AK062436.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:001-103-A05, full insert sequence | NA | coding protein | psRNATarget |