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BaseInfo

ncRNA ID osa-miRf11812-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GAAGAUCUAUUUUCGCAUGCGGC - NA
Stem-loop(if miRNA)            --     U              UUA  UGA      G
AUGCGAAGAUC  UAUUU CGCAUGCGGCCGUC   AG   CCGCAU C
|||||||||||  ||||| ||||||||||||||   ||   ||||||
UACGUUUCUAG  GUAAA GCGUACGCCGGCAG   UC   GGCGUA G
           UG     C              -UG  ---      A
Stem-loop sequence AUGCGAAGAUCUAUUUUCGCAUGCGGCCGUCUUAAGUGACCGCAUGCGAAUGCGGCUGUGACGGCCGCAUGCGCAAAUGGUGAUCUUUGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288261.1
ncRNA:23   CGGCGUACGCUUUUAUCUAGAAG   1
  |||||||||||||||||||||||
targets:3145   GCCGCAUGCGAAAAUAGAUCUUC   3167

0.0 Oryza sativa Japonica Group cDNA, clone: J090015P07, full insert sequence NA coding protein psRNATarget
AK242732.1
ncRNA:23   CGGCGUACGCUUUUAUC-UAGAAG   1
  *||||||||||||||||-||||||
targets:540   ACCGCAUGCGAAAAUAGGAUCUUC   563

3.0 Oryza sativa Japonica Group cDNA, clone: J090047M16, full insert sequence NA coding protein psRNATarget
CT827932.1
ncRNA:23   CGGCGUACGCUUUUAUCUAGAAG   1
  *||*|||*=|||||||||||||=
targets:1721   ACCACAUAUGAAAAUAGAUCUUU   1743

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108G07, full insert sequence NA coding protein psRNATarget