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BaseInfo

ncRNA ID osa-miRf11810-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - AUACUUAUCGGUGACGGGCUUU - NA
Stem-loop(if miRNA)      AAA                    U     AACGCACGAUA     UAAGUCAUCUCAACCGGAGAUUAGUAUA
AUGGA   AUACUUAUCGGUGACGGGCU UAGUU           GAGAU                            U
|||||   |||||||||||||||||||| |||||           |||||                            A
UGCCU   UGUGGAUAGUCACUGCCCGG AUCAA           GGCCG                            G
     -AC                    C     ------AUCUG     GGUUGUGUCUACUGAGUAGUCACUGCCC
Stem-loop sequence AUGGAAAAAUACUUAUCGGUGACGGGCUUUAGUUAACGCACGAUAGAGAUUAAGUCAUCUCAACCGGAGAUUAGUAUAUAGCCCGUCACUGAUGAGUCAUCUGUGUUGGGCCGGGUCUAAACUACGGCCCGUCACUGAUAGGUGUCAUCCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068923.1
ncRNA:22   UUUCGGGCAGUGGCUAUUCAUA   1
  ||||||||||||||||||||||
targets:1283   AAAGCCCGUCACCGAUAAGUAU   1304

0.0 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
AK070026.1
ncRNA:22   UUUCGGGCAGUGGCUAUUCAUA   1
  *=**|||||||||||||||*||
targets:2314   CGCCCCCGUCACCGAUAAGGAU   2335

2.5 Oryza sativa Japonica Group cDNA clone:J023036G16, full insert sequence NA coding protein psRNATarget
XM_015770015.1
ncRNA:22   UUUCGGGCAGUGGCUAUUCAUA   1
  *=**|||||||||||||||*||
targets:2348   CGCCCCCGUCACCGAUAAGGAU   2369

2.5 PREDICTED: Oryza sativa Japonica Group auxin response factor 7 (LOC4329672), mRNA auxin response factor 7(LOC4329672) coding protein psRNATarget