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BaseInfo

ncRNA ID	osa-miRf11806-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - CCUGGUUUUCUUGGAGCAUGAGGUU - NA
Stem-loop(if miRNA)	U               C                            CAAGAACAG  UU     UUU  UUUUAUCCUGGUUUU UUGGAGCAUGAGGUUAUCUCUCGGUUUU         UU  UGUCC   U  ||||||||||||||| ||||||||||||||||||||||||||||         ||  |||||   A  AAAAUAGGACCAAAA AACCUCGUACUCCAAUAGAGAGUCAAAA         AG  ACAGG   U A               A                            ---------  GC     UUU
Stem-loop sequence	UUUUUAUCCUGGUUUUCUUGGAGCAUGAGGUUAUCUCUCGGUUUUCAAGAACAGUUUUUGUCCUUUUAUUUUGGACACGGAAAAACUGAGAGAUAACCUCAUGCUCCAAAAAAACCAGGAUAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015771711.1	ncRNA:25   UUG----GAGUACGAGGUUCUUUUGGUCC   1   ||=----||||||||=|||||||=||||| targets:1517   AAUGCGGCUCAUGCUUCAAGAAAGCCAGG   1545 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine/threonine-protein kinase PBS1 (LOC4329463), mRNA	serine/threonine-protein kinase PBS1(LOC4329463)	coding protein	psRNATarget
AK120921.1	ncRNA:25   UUG----GAGUACGAGGUUCUUUUGGUCC   1   ||=----||||||||=|||||||=||||| targets:1523   AAUGCGGCUCAUGCUUCAAGAAAGCCAGG   1551 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023035D12, full insert sequence	NA	coding protein	psRNATarget
XM_015761462.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:970   AA--UAAUGCUCCAAGAAAACCAGA   992 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X5, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
XM_015761460.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:1096   AA--UAAUGCUCCAAGAAAACCAGA   1118 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X3, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
XM_015761461.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:1630   AA--UAAUGCUCCAAGAAAACCAGA   1652 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X4, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
AK071696.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2233   AA--UAAUGCUCCAAGAAAACCAGA   2255 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023109P16, full insert sequence	NA	coding protein	psRNATarget
XM_015761468.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2030   AA--UAAUGCUCCAAGAAAACCAGA   2052 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X10, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
XM_015761465.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2003   AA--UAAUGCUCCAAGAAAACCAGA   2025 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X8, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
XM_015761464.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2016   AA--UAAUGCUCCAAGAAAACCAGA   2038 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X7, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
XM_015761459.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2046   AA--UAAUGCUCCAAGAAAACCAGA   2068 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X2, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
XM_015761463.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2144   AA--UAAUGCUCCAAGAAAACCAGA   2166 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X6, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
XM_015761458.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2158   AA--UAAUGCUCCAAGAAAACCAGA   2180 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X1, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget
AK073048.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:1977   AA--UAAUGCUCCAAGAAAACCAGA   1999 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J033007C03, full insert sequence	NA	coding protein	psRNATarget
XM_015761467.1	ncRNA:25   UUGGAGUACGAGGUUCUUUUGGUCC   1   ||--|*||||||||||||||||||* targets:2030   AA--UAAUGCUCCAAGAAAACCAGA   2052 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase 1 (LOC4350414), transcript variant X9, mRNA	tropinone reductase 1(LOC4350414)	coding protein	psRNATarget