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BaseInfo

ncRNA ID osa-miRf11804-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UCUCGGUUGGUAACACCAACCGGU - NA
Stem-loop(if miRNA)        UUUU                          UAAAU
GAUCUUU    CCGGUUGGUGUUAUUAACCGGGACUA     A
|||||||    ||||||||||||||||||||||||||
UUAGAAA    GGCCAACCACAAUGGUUGGCUCUGAU     A
       UCAU                          UUCUA
Stem-loop sequence GAUCUUUUUUUCCGGUUGGUGUUAUUAACCGGGACUAUAAAUAAAUCUUUAGUCUCGGUUGGUAACACCAACCGGUACUAAAGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289098.1
ncRNA:24   UGGCCAACCACAAUGGUUGGCUCU   1
  *||||||||||||||||||||=||
targets:157   CCCGGUUGGUGUUACCAACCGGGA   180

1.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK289098.1
ncRNA:24   UGGCCAACCACAAUGGUUGGCUCU   1
  *|||||||||*||||||||||=||
targets:114   CCCGGUUGGUUUUACCAACCGGGA   137

2.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
XM_015758314.1
ncRNA:24   UGGCCAACCACAAUGGUUGGCUCU   1
  *||||||*|||||||||||||=||
targets:916   CCCGGUUUGUGUUACCAACCGGGA   939

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA uncharacterized LOC107278346(LOC107278346) coding protein psRNATarget
AK288424.1
ncRNA:24   UGGCCAACCACAAUGGUUGGCUCU   1
  *||||||*|||||||||||||=||
targets:2391   CCCGGUUAGUGUUACCAACCGGGA   2414

2.5 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget
AK288405.1
ncRNA:24   UGGCCAACCACAAUGGUUGGCUCU   1
  *||*|||||||||||||||||=||
targets:2398   CCCCGUUGGUGUUACCAACCGGGA   2421

1.5 Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence NA coding protein psRNATarget
AK099726.1
ncRNA:24   UGGCCAACCACAAUGGUUGGCUCU   1
  ||||||||||**||||||||||||
targets:1102   ACCGGUUGGUAGUACCAACCGAGA   1125

2.5 Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence NA coding protein psRNATarget