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BaseInfo

ncRNA ID	osa-miRf11800-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GGUGUUACCAAUCGGGACUA - NA
Stem-loop(if miRNA)	----UCUUU       GUUCAAAUGCUGUCAG GAUCUUUAGUCCUGGUUGGUAACACCAACC         AGUCCCG                G ||||||||||||||||||||||||||||||         ||||||| CUAGAAAUCAGGGCUAACCAUUGUGGUUGG         UCUAGGG                G                               CCUUUGAUU       CCCCCCUGGACUGUUC
Stem-loop sequence	GAUCUUUAGUCCUGGUUGGUAACACCAACCUCUUUAGUCCCGGUUCAAAUGCUGUCAGGGCUUGUCAGGUCCCCCCGGGAUCUUUAGUUUCCGGUUGGUGUUACCAAUCGGGACUAAAGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164982.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||||||||||=||| targets:129   UAGUCCCGAUUGGUAAUACC   148 Target Full Sequence	1.5	Sequence 2646 from Patent EP2559767	NA	coding protein	psRNATarget
HI404521.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||||||||||=||| targets:129   UAGUCCCGAUUGGUAAUACC   148 Target Full Sequence	1.5	Sequence 2646 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236651.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||||||||||=||| targets:129   UAGUCCCGAUUGGUAAUACC   148 Target Full Sequence	1.5	Sequence 2646 from Patent EP2985353	NA	coding protein	psRNATarget
AK242216.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||=||||||||||| targets:664   UAGUCCCGGUUGGUAACACC   683 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||=||||||||||| targets:1706   UAGUCCCGGUUGGUAACACC   1725 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK289098.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||=||||||||||| targets:244   UAGUCCCGGUUGGUAACACC   263 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||=||||||||||| targets:1849   UAGUCCCGGUUGGUAACACC   1868 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||||=||||||||||| targets:53   UAGUCCCGGUUGGUAACACC   72 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK121472.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||=|||=||||||||||| targets:2066   UAGUUCCGGUUGGUAACACC   2085 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   ||||||=|=||||||||||| targets:5002   UAGUCCUGGUUGGUAACACC   5021 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   *|||||=|=||||||||||| targets:1941   AAGUCCUGGUUGGUAACACC   1960 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:20   AUCAGGGCUAACCAUUGUGG   1   |||*||||=||||||||||| targets:1317   UAGCCCCGGUUGGUAACACC   1336 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget