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BaseInfo

ncRNA ID	osa-miRf11793-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CCUCCUCAAGGACCGUAGAA - NA
Stem-loop(if miRNA)	C               A           UUUUUUCUAUUGUAAAUU     C   U   --  CCUAGGUACUAUGAGAUACC GAG AAUUUUACGGUCCUU AGGAGGUACCA                  UGGUA CUU UGG  UA                    A ||| ||||||||||||||| |||||||||||                  ||||| ||| |||  ||                    U CUC UUAAGAUGCCAGGAA UCCUCCAUGGU                  CUCCA UGG UUU  AA                    G    A               C           -----------------A     -   -   UU  AUCACGUUUUAAACCAUGGA
Stem-loop sequence	GAGCAAUUUUACGGUCCUUAAGGAGGUACCAUUUUUUCUAUUGUAAAUUUGGUACCUUUUGGUACCUAGGUACUAUGAGAUACCAUGAGGUACCAAAUUUUGCACUAAAUUUUUGGUACCUCAUGGUACCUCCUCAAGGACCGUAGAAUUACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015757723.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||||||||||=||||||||| targets:429   UUCUACGGUCUUUGAGGAGG   448 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group TD and POZ domain-containing protein 4 (LOC9271695), mRNA	TD and POZ domain-containing protein 4(LOC9271695)	coding protein	psRNATarget
XM_015786627.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   |||||=|||||||||||||* targets:541   UUCUAUGGUCCUUGAGGAGA   560 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281210 (LOC107281210), mRNA	uncharacterized LOC107281210(LOC107281210)	coding protein	psRNATarget
AK072846.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   |||||||||||||*|||||| targets:1691   UUCUACGGUCCUUAAGGAGG   1710 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023143D15, full insert sequence	NA	coding protein	psRNATarget
XM_015790029.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   |||||||||||||*|||||| targets:2072   UUCUACGGUCCUUAAGGAGG   2091 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342289 (LOC4342289), transcript variant X1, mRNA	uncharacterized LOC4342289(LOC4342289)	coding protein	psRNATarget
XM_015790030.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   |||||||||||||*|||||| targets:2116   UUCUACGGUCCUUAAGGAGG   2135 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342289 (LOC4342289), transcript variant X2, mRNA	uncharacterized LOC4342289(LOC4342289)	coding protein	psRNATarget
EF576317.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||=|||*||||||||||||| targets:249   UUUUACUGUCCUUGAGGAGG   268 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) clone OSS-1-96-A1 protein kinase c conserved region 2 (calb) mRNA, partial cds	NA	coding protein	psRNATarget
AK104165.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||=|||*||||||||||||| targets:712   UUUUACUGUCCUUGAGGAGG   731 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:006-212-C07, full insert sequence	NA	coding protein	psRNATarget
AK073631.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||=|||*||||||||||||| targets:798   UUUUACUGUCCUUGAGGAGG   817 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033052D22, full insert sequence	NA	coding protein	psRNATarget
XM_015772115.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||=|||*||||||||||||| targets:949   UUUUACUGUCCUUGAGGAGG   968 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group GTPase activating protein 1 (LOC4329192), mRNA	GTPase activating protein 1(LOC4329192)	coding protein	psRNATarget
AK242593.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   |||||=|||*|||||||||| targets:1708   UUCUAUGGUACUUGAGGAGG   1727 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090012G17, full insert sequence	NA	coding protein	psRNATarget
XM_015760251.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||=|||*||||||||||||| targets:43   UUUUACUGUCCUUGAGGAGG   62 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group protein FAR1-RELATED SEQUENCE 5-like (LOC107279278), mRNA	protein FAR1-RELATED SEQUENCE 5-like(LOC107279278)	coding protein	psRNATarget
AK288182.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||=|||*||||||||||||| targets:1294   UUUUACUGUCCUUGAGGAGG   1313 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence	NA	coding protein	psRNATarget
AK242639.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   ||||||**|||||||||||| targets:365   UUCUACAAUCCUUGAGGAGG   384 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090024A18, full insert sequence	NA	coding protein	psRNATarget
AK120940.1	ncRNA:20   AAGAUGCCAGGAACUCCUCC   1   *|||||||||||||||*||* targets:1862   CUCUACGGUCCUUGAGUAGA   1881 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023037H21, full insert sequence	NA	coding protein	psRNATarget