Search result

BaseInfo

ncRNA ID	osa-miRf11791-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AUCGGAAGCAAUUUGGUACC - NA
Stem-loop(if miRNA)	U              A          U           --  UA A  UCACGGUACUAAAU GUUUCCGAUC UUGGAUUUAGC  UG  C G  |||||||||||||| |||||||||| |||||||||||  ||  | G  AGUGCCAUGGUUUA CGAAGGCUAG AAUCUAGAUUG  AC  G A G              A          U           UU  GG U
Stem-loop sequence	UUCACGGUACUAAAUAGUUUCCGAUCUUUGGAUUUAGCUGUACAGGAUGGGCAUUGUUAGAUCUAAUGAUCGGAAGCAAUUUGGUACCGUGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015786123.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||||||||=||||||| targets:657   GGUACCAAAUUGUUUCCGAU   676 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
AK287529.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||||||||=||||||| targets:168   GGUACCAAAUUGUUUCCGAU   187 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||||||||=||||||| targets:168   GGUACCAAAUUGUUUCCGAU   187 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
XM_015795630.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||*=|||||||||||| targets:1962   GGUACCCGAUUGCUUCCGAU   1981 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345298 (LOC4345298), transcript variant X3, mRNA	uncharacterized LOC4345298(LOC4345298)	coding protein	psRNATarget
AK067028.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||*=|||||||||||| targets:1969   GGUACCCGAUUGCUUCCGAU   1988 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013091B08, full insert sequence	NA	coding protein	psRNATarget
AK099878.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||*=|||||||||||| targets:2089   GGUACCCGAUUGCUUCCGAU   2108 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013111I02, full insert sequence	NA	coding protein	psRNATarget
XM_015795628.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||*=|||||||||||| targets:2088   GGUACCCGAUUGCUUCCGAU   2107 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345298 (LOC4345298), transcript variant X1, mRNA	uncharacterized LOC4345298(LOC4345298)	coding protein	psRNATarget
XM_015795629.1	ncRNA:20   CCAUGGUUUAACGAAGGCUA   1   ||||||*=|||||||||||| targets:2089   GGUACCCGAUUGCUUCCGAU   2108 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345298 (LOC4345298), transcript variant X2, mRNA	uncharacterized LOC4345298(LOC4345298)	coding protein	psRNATarget