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BaseInfo

ncRNA ID osa-miRf11758-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - GAGCUCGAGCUCGAACGAGCUCGA - NA
Stem-loop(if miRNA) U      -            -          A  ------     -U     AAA  UCA
 UGCCGA GCUCGAGCUCGA ACGAGCUCGA CC      GAGCU  GCCUA   GC   A
 |||||| |||||||||||| |||||||||| ||      |||||  |||||   ||
 ACGGCU CGAGCUCGAGCU UGUUCGAGCU GG      CUCGG  CGGAU   CG   A
G      U            G          C  CUCUAG     CU     -AA  UGG
Stem-loop sequence UUGCCGAGCUCGAGCUCGAACGAGCUCGAACCGAGCUUGCCUAAAAGCUCAAAGGUGCAAUAGGCUCGGCUCGAUCUCGGCUCGAGCUUGUGUCGAGCUCGAGCUUCGGCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT828221.1
ncRNA:24   AGCUCGAGCAAGCUCGAGCUCGAG   1
  |||||||||||=||||||||||||
targets:1164   UCGAGCUCGUUUGAGCUCGAGCUC   1187

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110H03, full insert sequence NA coding protein psRNATarget
XM_015787314.1
ncRNA:24   AGCUCGAGCAAGCUCGAGCUCGAG   1
  *||=|||||*||||||||||||||
targets:803   ACGGGCUCGCUCGAGCUCGAGCUC   826

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339952 (LOC4339952), mRNA uncharacterized LOC4339952(LOC4339952) coding protein psRNATarget
AK109712.1
ncRNA:24   AGCUCGAGCAAGCUCGAGCUCGAG   1
  *||=|||||*||||||||||||||
targets:460   ACGGGCUCGCUCGAGCUCGAGCUC   483

1.0 Oryza sativa Japonica Group cDNA clone:002-145-H03, full insert sequence NA coding protein psRNATarget
AK287717.1
ncRNA:24   AGCUCGAGCAAGCUCGAGCUCGAG   1
  |*|||||*|*||||||||||||||
targets:1400   UAGAGCUAGCUCGAGCUCGAGCUC   1423

2.0 Oryza sativa Japonica Group cDNA, clone: J065135G12, full insert sequence NA coding protein psRNATarget