ncRNA ID | osa-miRf11758-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - GAGCUCGAGCUCGAACGAGCUCGA - NA |
Stem-loop(if miRNA) |
U      -            -          A  ------     -U     AAA  UCA  UGCCGA GCUCGAGCUCGA ACGAGCUCGA CC      GAGCU  GCCUA   GC   A  |||||| |||||||||||| |||||||||| ||      |||||  |||||   ||  ACGGCU CGAGCUCGAGCU UGUUCGAGCU GG      CUCGG  CGGAU   CG   A G      U            G          C  CUCUAG     CU     -AA  UGG |
Stem-loop sequence | UUGCCGAGCUCGAGCUCGAACGAGCUCGAACCGAGCUUGCCUAAAAGCUCAAAGGUGCAAUAGGCUCGGCUCGAUCUCGGCUCGAGCUUGUGUCGAGCUCGAGCUUCGGCAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT828221.1 |
|
1.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110H03, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015787314.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339952 (LOC4339952), mRNA | uncharacterized LOC4339952(LOC4339952) | coding protein | psRNATarget | |||||||||
AK109712.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:002-145-H03, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK287717.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J065135G12, full insert sequence | NA | coding protein | psRNATarget |