Search result

BaseInfo

ncRNA ID osa-miRf11744-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GCCAAUGUCCAUGGCGCUGA - NA
Stem-loop(if miRNA)     --A           AC              UACG
GCUG   AUUUAGCGCCA  GACGUUGGCGCUGA    U
||||   |||||||||||  ||||||||||||||    U
CGGC   UGAGUCGCGGU  CUGUAACCGCGAUU    A
    ACC           AC              CAAU
Stem-loop sequence GCUGAAUUUAGCGCCAACGACGUUGGCGCUGAUACGUUAUAACUUAGCGCCAAUGUCCAUGGCGCUGAGUCCACGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015768213.1
ncRNA:20   AGUCGCGGUACCUGUAACCG   1
  |||||||||*||||||||||
targets:56   UCAGCGCCAAGGACAUUGGC   75

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266724 (LOC9266724), mRNA uncharacterized LOC9266724(LOC9266724) coding protein psRNATarget
AK100398.1
ncRNA:20   AGUCGCGGUACCUGUAACCG   1
  |||*=|=|||||||||||||
targets:1654   UCAAUGUCAUGGACAUUGGC   1673

3.0 Oryza sativa Japonica Group cDNA clone:J023086M16, full insert sequence NA coding protein psRNATarget
BT129694.1
ncRNA:20   AGUCGCGGUACCUGUAACCG   1
  *||*|||||*||||||||||
targets:177   GCAACGCCAAGGACAUUGGC   196

2.5 Oryza sativa clone RRlibB00678 mRNA sequence NA coding protein psRNATarget
EF576076.1
ncRNA:20   AGUCGCGGUACCUGUAACCG   1
  *||*|||||*||||||||||
targets:177   GCAACGCCAAGGACAUUGGC   196

2.5 Oryza sativa (indica cultivar-group) clone OSE-576-637-E12 40S ribosomal protein S29 mRNA, complete cds NA coding protein psRNATarget
BT129981.1
ncRNA:20   AGUCGCGGUACCUGUAACCG   1
  *||*|||||*||||||||||
targets:133   GCAACGCCAAGGACAUUGGC   152

2.5 Oryza sativa clone RRlibB00798 mRNA sequence NA coding protein psRNATarget
XM_015776997.1
ncRNA:20   AGUCGCGGUACCUGUAACCG   1
  *||*|||||*||||||||||
targets:212   GCAACGCCAAGGACAUUGGC   231

2.5 PREDICTED: Oryza sativa Japonica Group 40S ribosomal protein S29 (LOC9267266), mRNA 40S ribosomal protein S29(LOC9267266) coding protein psRNATarget