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BaseInfo

ncRNA ID	osa-miRf11742-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AGCUCGAGCUAGCUUGUUAG - NA
Stem-loop(if miRNA)	U  GA               -   CGGC   UUAU  UAA      -  AAA GCUCGU AG  UAACAAGCUAGCUCG GCU    UCA    CG   CGAGCU AG   C |||||| ||  ||||||||||||||| |||    |||    ||   |||||| || CGAGCA UC  AUUGUUCGAUCGAGC CGA    AGU    GC   GCUCGG UC   C       C  GG               U   ---A   --UU  UCC      C  GAC
Stem-loop sequence	GCUCGUUAGGAUAACAAGCUAGCUCGGCUCGGCUCAUUAUCGUAACGAGCUAGAAACCCAGCUCGGCUCGCCUCGUUUGAAAGCUCGAGCUAGCUUGUUAGGCUCACGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015757797.1	ncRNA:20   GAUU-GUUCGAUCGAGCUCGA   1   ||||-|=|||||||||||||| targets:488   CUAAACGAGCUAGCUCGAGCU   508 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group wall-associated receptor kinase 1 (LOC4347988), transcript variant X1, mRNA	wall-associated receptor kinase 1(LOC4347988)	coding protein	psRNATarget
AK107845.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   |||=|*|||||||||||||| targets:15   CUAGCUAGCUAGCUCGAGCU   34 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-134-A02, full insert sequence	NA	coding protein	psRNATarget
XM_015794154.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   |||=|*|||||||||||||| targets:115   CUAGCUAGCUAGCUCGAGCU   134 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group protein YLS9 (LOC4345274), mRNA	protein YLS9(LOC4345274)	coding protein	psRNATarget
XM_015793085.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   |*|||=|||||||||||||| targets:508   CAAACGAGCUAGCUCGAGCU   527 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X1, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
XM_015793088.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   |*|||=|||||||||||||| targets:520   CAAACGAGCUAGCUCGAGCU   539 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X3, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
AK071528.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   =|||=|||||||||*||||| targets:137   UUAAUAAGCUAGCUAGAGCU   156 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023102E22, full insert sequence	NA	coding protein	psRNATarget
AK059793.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   =|||=|||||||||*||||| targets:142   UUAAUAAGCUAGCUAGAGCU   161 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-204-E07, full insert sequence	NA	coding protein	psRNATarget
XM_015787204.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   =|||=|||||||||*||||| targets:274   UUAAUAAGCUAGCUAGAGCU   293 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342065 (LOC4342065), mRNA	uncharacterized LOC4342065(LOC4342065)	coding protein	psRNATarget
AF216531.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   *||||=|||*|||||||||| targets:232   AUAACGAGCCAGCUCGAGCU   251 Target Full Sequence	2.5	Oryza sativa extensin-like proline-rich protein RiP-5 mRNA, partial cds	NA	coding protein	psRNATarget
AK069819.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   *||||=|||*|||||||||| targets:1436   AUAACGAGCCAGCUCGAGCU   1455 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023026N18, full insert sequence	NA	coding protein	psRNATarget
XM_015756939.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   *|||**|||||||||||||| targets:104   AUAAGUAGCUAGCUCGAGCU   123 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group cytochrome P450 71A1 (LOC4347176), mRNA	cytochrome P450 71A1(LOC4347176)	coding protein	psRNATarget
XM_015756103.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   *|||||*||||||||*|||| targets:2821   GUAACACGCUAGCUCCAGCU   2840 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278933 (LOC107278933), mRNA	uncharacterized LOC107278933(LOC107278933)	coding protein	psRNATarget
AK288293.1	ncRNA:20   GAUUGUUCGAUCGAGCUCGA   1   *|||||*||||||||*|||| targets:2827   GUAACACGCUAGCUCCAGCU   2846 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090019F16, full insert sequence	NA	coding protein	psRNATarget