ncRNA ID | osa-miRf11732-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - CUCUCUCUCCCUUGAAGGCUAUCU - NA |
Stem-loop(if miRNA) |
     -A      U              A     ----UGG    -U     U CUUGG  UCUCUC CUCCCUUGAAGGCU UCUCA       AGGU  UGAUG A |||||  |||||| |||||||||||||| |||||       ||||  ||||| C GAACC  AGAGAG GAGGGGGCUUCCGA AGAGU       UCCG  GUUAC A      GA      -              A     CAAAGAA    UU     C |
Stem-loop sequence | CUUGGAUCUCUCUCUCCCUUGAAGGCUAUCUCAUGGAGGUUUGAUGUACACCAUUGUUGCCUAAGAAACUGAGAAAGCCUUCGGGGGAGGAGAGAAGCCAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015758259.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group replication factor C subunit 3 (LOC4349480), mRNA | replication factor C subunit 3(LOC4349480) | coding protein | psRNATarget | |||||||||
AK111330.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:002-181-E02, full insert sequence | NA | coding protein | psRNATarget |