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BaseInfo

ncRNA ID	osa-miRf11730-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UCGGACCCACAUGUCAGCCUCACUC - NA
Stem-loop(if miRNA)	A        A  C                 AU   CGGG  CC   UC CAAAU CCACUCGG CC ACAUGUCAGCCUCACUC  CAU    UC  GCA  A ||||| |||||||| || |||||||||||||||||  |||    ||  |||  C GUUUA GGUGGGCC GG UGUACAGUCGGAGUGAG  GUA    AG  UGU  U      C        C  A                 AG   ----  UU   UU
Stem-loop sequence	CAAAUACCACUCGGACCCACAUGUCAGCCUCACUCAUCAUCGGGUCCCGCAUCACUUUUGUUUGAAUGGAGAGUGAGGCUGACAUGUAGGCCCGGGUGGCAUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK106805.1	ncRNA:25   CUCA-CUCCGACUGUACACCCAGGCU   1   ||||-|||||||||||||||||||** targets:701   GAGUAGAGGCUGACAUGUGGGUCCAU   726 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-116-C03, full insert sequence	NA	coding protein	psRNATarget
XM_015784013.1	ncRNA:25   CUCA-CUCCGACUGUACACCCAGGCU   1   ||||-|||||||||||||||||||** targets:952   GAGUAGAGGCUGACAUGUGGGUCCAU   977 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group thyroid receptor-interacting protein 6 (LOC4337954), mRNA	thyroid receptor-interacting protein 6(LOC4337954)	coding protein	psRNATarget
AK111706.1	ncRNA:25   CUCA-CUCCGACUGUACACCCAGGCU   1   ||||-|||||*|||||||||||||*| targets:296   GAGUUGAGGCCGACAUGUGGGUCCCA   321 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023012M11, full insert sequence	NA	coding protein	psRNATarget
AK107277.1	ncRNA:25   CUCACUCCGACUGUACACCCAGGCU   1   |||*||||*||||||||||||||*| targets:955   GAGGGAGGAUGACAUGUGGGUCCCA   979 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-126-A07, full insert sequence	NA	coding protein	psRNATarget
AK288481.1	ncRNA:25   CUCACUCCGACUGUACACCCAGGCU   1   |*|||||*|||||||||||||||*| targets:1787   GUGUGAGACUGACAUGUGGGUCCCA   1811 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090039O20, full insert sequence	NA	coding protein	psRNATarget
AK060996.1	ncRNA:25   CUC-----ACUCCGACUGUACACCCAGGCU   1   |||-----|||||*||||||||||||||*| targets:976   GAGGGAACUGAGGAUGACAUGUGGGUCCCA   1005 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-203-E08, full insert sequence	NA	coding protein	psRNATarget
XM_015775230.1	ncRNA:25   CUCACUCCGACUGUACACCCAGGCU   1   ***|***||||||||||||||||*| targets:1018   UUUUAUAGCUGACAUGUGGGUCCCA   1042 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X2, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget
AK243575.1	ncRNA:25   CUCACUCCGACUGUACACCCAGGCU   1   ***|***||||||||||||||||*| targets:1143   UUUUAUAGCUGACAUGUGGGUCCCA   1167 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100082H15, full insert sequence	NA	coding protein	psRNATarget
XM_015775229.1	ncRNA:25   CUCACUCCGACUGUACACCCAGGCU   1   ***|***||||||||||||||||*| targets:1183   UUUUAUAGCUGACAUGUGGGUCCCA   1207 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X1, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget
XM_015775234.1	ncRNA:25   CUCACUCCGACUGUACACCCAGGCU   1   ***|***||||||||||||||||*| targets:1193   UUUUAUAGCUGACAUGUGGGUCCCA   1217 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X6, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget
XM_015775231.1	ncRNA:25   CUCACUCCGACUGUACACCCAGGCU   1   ***|***||||||||||||||||*| targets:1193   UUUUAUAGCUGACAUGUGGGUCCCA   1217 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X3, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget