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BaseInfo

ncRNA ID	ath-miRf10221-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - GAUACUCGACCAGGGGGUCGAGUGG - NA
Stem-loop(if miRNA)	A         AGGG         A   --- G  G G  AA      A GUGAUG UACUCGACC    GGUUGAGUA CAU   G UA A UA  UGGCCG G |||||| |||||||||    ||||||||| |||   | || | ||  |||||| UACUGC GUGAGCUGG    CCAGCUCAU GUG   C GU U GU  ACUGGU U       G         GGGA         A   AAG G  G G  GG      G
Stem-loop sequence	GUGAUGAUACUCGACCAGGGGGUUGAGUAACAUGGUAGAGUAAAUGGCCGAGUGUGGUCAGGUGGUGUGGCGAAGUGAUACUCGACCAGGGGGUCGAGUGGCGUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT014714.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   ||||||||||||||||||||||||| targets:230   CCACUCGACCCCCUGGUCGAGUAUC   254 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   |=||||||||||||||||||||||| targets:181   CUACUCGACCCCCUGGUCGAGUAUC   205 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   ||||||||||||||||||||||||| targets:230   CCACUCGACCCCCUGGUCGAGUAUC   254 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   |=||||||||||||||||||||||| targets:181   CUACUCGACCCCCUGGUCGAGUAUC   205 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   ==||||||||||||||||||||||| targets:308   UUACUCGACCCCCUGGUCGAGUAUC   332 Target Full Sequence	0.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   ==||*|||||||||||||||||||| targets:583   UUACYCGACCCCCUGGUCGAGUAUC   607 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT014714.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   ==||||*|||||||||||||||||| targets:301   UUACUCAACCCCCUGGUCGAGUAUC   325 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   ==||||*|||||||||||||||||| targets:301   UUACUCAACCCCCUGGUCGAGUAUC   325 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   |||||||||||||||||||||||*| targets:90   CCACUCGACCCCCUGGUCGAGUAGC   114 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   |||||||||||||||||||||||** targets:124   CCACUCGACCCCCUGGUCGAGUAGA   148 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   |||||||||||||||||||||||** targets:499   CCACUCGACCCCCUGGUCGAGUAGA   523 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   |||||||||||||||||||||||** targets:499   CCACUCGACCCCCUGGUCGAGUAGA   523 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:25   GGUGAGCUGGGGGACCAGCUCAUAG   1   =||||||||||||||||||||||** targets:1571   UCACUCGACCCCCUGGUCGAGUAGA   1595 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget