Search result

BaseInfo

ncRNA ID	ath-miRf10220-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CACUCGACCUCAUGGUCGAGUGA - NA
Stem-loop(if miRNA)	G AGG          C           ACG G   GAGUGU G      -AGA           CAGGU GGU A   CACUCGACCA GGGGUCGAGUG   U AUC      U GUCAGG    UACUCGACUUC     U ||| |   |||||||||| |||||||||||   | |||      | ||||||    |||||||||||     G CUA U   GUGAGCUGGU CUCCAGCUCAC   A UGG      A UAGUCU    GUGAGCUGGAG     A    G GAA          A           AGA G   --AGGU G      GUUG           AAGUG
Stem-loop sequence	GGUGAAGGCACUCGACCACGGGGUCGAGUGACGUGAUCGAGUGUUGGUCAGGAGAUACUCGACUUCCAGGUUGAGUGAAGAGGUCGAGUGGUUGUCUGAUGAUGGAGGUGAAGACACUCGACCUCAUGGUCGAGUGAAGUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:23   AGUGAGCUGGUACUCCAGCUCAC   1   ||||||||||||||||||||||| targets:516   UCACUCGACCAUGAGGUCGAGUG   538 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   AGUGAGCUGGUACUCCAGCUCAC   1   *||||||||||*||||||||||| targets:1150   CCACUCGACCACGAGGUCGAGUG   1172 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:23   AGUGAGCUGGUACUCCAGCUCAC   1   *||||||||||*||||||||||* targets:1526   CCACUCGACCACGAGGUCGAGUA   1548 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget