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BaseInfo

ncRNA ID	osa-miRf11718-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - GGUUGGUAAUACCAACCGGGAGU - NA
Stem-loop(if miRNA)	U     C                A      G       ------------CAACC     UAAAGUGGUAAUAUUUAAUCCUGGUUGGUAGUAUCAAUC  UUAGU CCGGUUGGUAAUACCA CCGGGA UAAAGAU                 GGGAC                                       G  ||||| |||||||||||||||| |||||| |||||||                 |||||  AAUCA GGCCAACCAUUGUGGU GGCCCU AUUUCUA                 GUAGG                                       G A     A                A      G       CUUAAAAUCAGGACCAA     GGACAGUCUACAUACAGUCCCUCGGUUCCUAGAAAUUAG
Stem-loop sequence	UUUAGUCCCGGUUGGUAAUACCAACCGGGAGUAAAGAUCAACCGGGACUAAAGUGGUAAUAUUUAAUCCUGGUUGGUAGUAUCAAUCGGGAUUAAAGAUCCUUGGCUCCCUGACAUACAUCUGACAGGGGAUGAACCAGGACUAAAAUUCAUCUUUAGUCCCGGAUGGUGUUACCAACCGGAACUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK061057.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   ||||=|||||||||||||||||| targets:402   ACUCUCGGUUGGUAUUACCAACC   424 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |||||||||||||*||||||||| targets:111   ACUCCCGGUUGGUUUUACCAACC   133 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |*|||||||||||=||||||||| targets:154   AGUCCCGGUUGGUGUUACCAACC   176 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |*||||||||||||||||||||| targets:1915   AGUCCCGGUUGGUAUUACCAACC   1937 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |*|||||||||||=||||||||| targets:1383   AGUCCCGGUUGGUGUUACCAACC   1405 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |*|||||||||||=||||||||| targets:1837   AGUCCCGGUUGGUGUUACCAACC   1859 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK099726.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |*|*||||||||||*|||||||| targets:1099   AGUACCGGUUGGUAGUACCAACC   1121 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |**|||||||||||*|||||||| targets:1376   AGCCCCGGUUGGUAAUACCAACC   1398 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   |*||||*||||||=||||||||| targets:2395   AGUCCCCGUUGGUGUUACCAACC   2417 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   **|=||||||||||*|||||||= targets:2   UAUUCCGGUUGGUAAUACCAACU   24 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
HI404518.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   **|=||||||||||*|||||||= targets:2   UAUUCCGGUUGGUAAUACCAACU   24 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
JB164979.1	ncRNA:23   UGAGGGCCAACCAUAAUGGUUGG   1   **|=||||||||||*|||||||= targets:2   UAUUCCGGUUGGUAAUACCAACU   24 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget